Name: Nonlabens antarcticus JCM 14068
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 161444

Type strain:

Species: Nonlabens antarcticus

Culture col. no.: JCM 14068, KCCM 43019

Strain history: K. K. Kwon AKS622.

NCBI tax ID(s): 392714 (species)

Special Collections

Section

Nonlabens antarcticus JCM 14068 is a Gram-negative bacterium that was isolated from Core of glacier ice collected from the coast near King Sejong station on King George Island.

Gram-negative
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Nonlabens*
	Species	**Nonlabens antarcticus**
	Full Scientific Name (LPSN)	Nonlabens antarcticus Kwon et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %98.604

[Ref.: #69480]	Motility	no Confidence in %91.5

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	19 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	no Confidence in %90.333
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Core of glacier ice collected from the coast near King Sejong station on King George Island
[Ref.: #67770]	Geographic location (country and/or sea, region)	King George Island
[Ref.: #67770]	Country	Antarctica
[Ref.: #67770]	Country ISO 3 Code	ATA
[Ref.: #67770]	Continent	Antarctica
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nonlabens antarcticus strain AKS622 16S ribosomal RNA gene, partial sequence	DQ660393	1483	GenBank ENA	392714 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Nonlabens antarcticus JCM 14068	GCA_015356755	contig	GenBank ENA	392714 tax ID	*
[Ref.: #66792]	Nonlabens antarcticus strain JCM 14068	392714.3	wgs	PATRIC	392714 tax ID	*

[Ref.: #67770]

GC-content

37.9 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nonlabens antarcticus strain JCM 14068 PATRIC: 392714.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nonlabens antarcticus strain JCM 14068 PATRIC: 392714.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98.604	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.09	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.333	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	85.455	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	98.43	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	91.5	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 14068, KCCM 43019

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nonlabens antarcticus sp. nov., a psychrophilic bacterium isolated from glacier ice, and emended descriptions of Nonlabens marinus Park et al. 2012 and Nonlabens agnitus Yi and Chun 2012.	Kwon YM, Yang SH, Kwon KK, Kim SJ	Int J Syst Evol Microbiol	10.1099/ijs.0.056606-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Nonlabens antarcticus strain JCM 14068

Nonlabens antarcticus strain JCM 14068

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