"Streptomyces abikoensis" AS-803 is an obligate aerobe, spore-forming, Gram-positive bacterium that builds an aerial mycelium and produces antibiotic compounds.
antibiotic compound production spore-forming Gram-positive rod-shaped obligate aerobe genome sequence 16S sequence Bacteria
SI-ID 45528
| @ref 20215 |
Last LPSN update
2026-02-09 11:21:54 |
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Kitasatosporales |
| Family Streptomycetaceae |
| Genus Streptomyces |
| Species "Streptomyces abikoensis" |
| Full scientific name Streptomyces abikoensis corrig. Umezawa et al. 1951 |
|
Synonyms (20)
"Streptomyces abikoensum"
"Streptomyces luteoverticillatus" Streptomyces olivoreticuli Streptoverticillium olivoreticulum "Streptomyces hesseae" Streptoverticillium parvisporogenum Streptoverticillium ehimense Streptoverticillium parvisporogenes Streptomyces parvisporogenes Streptomyces ekimensis "Streptomyces olivoreticuli" Streptomyces ehimensis Streptoverticillium abikoense Streptoverticillium olivoreticuli subsp. cellulophilum Streptoverticillium olivoreticulum subsp. cellulophilum Streptoverticillium olivoreticuli "Streptomyces ehimensis" Streptoverticillium luteoverticillatum Streptomyces abikoensis Streptomyces luteoverticillatus |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 9834 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive  | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 18678 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 18678 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 18678 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 18678 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 18678 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 18678 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 38258 | MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum | Distilled water make up to (1000.000 ml);Agar (15.000 g);Glucose (4.000g);Yeast extract (4.000 g);Malt extract (10.000 g);Calcium carbonate (2.000 g) | |||
| 9834 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 115976 | CIP Medium 57 | Medium recipe at CIP |
| 9834 | Compoundabikoviromycin |
| @ref | Compound | Percentage | |
|---|---|---|---|
| 18678 | Lysozyme | 1 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 18678 | 22599 ChEBI | arabinose | - | ||
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 18678 | 62968 ChEBI | cellulose | - | ||
| 115976 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 115976 | 4853 ChEBI | esculin | - | hydrolysis | |
| 18678 | 28757 ChEBI | fructose | + | ||
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 18678 | 17234 ChEBI | glucose | + | ||
| 115976 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 18678 | 29864 ChEBI | mannitol | + | ||
| 18678 | 17268 ChEBI | myo-inositol | + | ||
| 115976 | 17632 ChEBI | nitrate | - | reduction | |
| 115976 | 17632 ChEBI | nitrate | - | respiration | |
| 115976 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 18678 | 16634 ChEBI | raffinose | - | ||
| 18678 | 26546 ChEBI | rhamnose | - | ||
| 18678 | 17992 ChEBI | sucrose | - | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 18678 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 115976 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 115976 | amylase | + | ||
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 115976 | beta-galactosidase | - | 3.2.1.23 | |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 115976 | caseinase | + | 3.4.21.50 | |
| 115976 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 115976 | DNase | + | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 115976 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 115976 | gelatinase | + | ||
| 68368 | gelatinase | + | from API 20E | |
| 115976 | lecithinase | + | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 115976 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 115976 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 115976 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 115976 | oxidase | - | ||
| 115976 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 115976 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 115976 | tween esterase | - | ||
| 115976 | urease | - | 3.5.1.5 | |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1464877v1 assembly for Streptomyces abikoensis JCM 4002 | contig | GCA_014648775   | 97398.3  | 8109765240  | 97398 | 73.11 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Streptomyces abikoensis strain CGMCC 4.1662 16S ribosomal RNA gene, partial sequence | HQ244450 | 1488 |  | 97398 | |
| 20218 | Streptomyces abikoensis strain DSM 40831 16S ribosomal RNA gene, partial sequence | KC954556 | 1347 | | 97398 | |
| 20218 | Streptoverticillium abikoense partial 16S rRNA | X53168 | 1358 | | 97398 | |
| 20218 | Streptomyces abikoensis gene for 16S rRNA, partial sequence, strain: NBRC 13860 | AB184537 | 1456 | | 97398 | |
| 124043 | Streptomyces abikoensis strain JCM 4002 16S ribosomal RNA gene, partial sequence. | MT760471 | 1333 | | 97398 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Partner choice and fidelity stabilize coevolution in a Cretaceous-age defensive symbiosis. | Kaltenpoth M, Roeser-Mueller K, Koehler S, Peterson A, Nechitaylo TY, Stubblefield JW, Herzner G, Seger J, Strohm E. | Proc Natl Acad Sci U S A | 10.1073/pnas.1400457111 | 2014 | | |
| Zinc-Solubilizing Streptomyces spp. as Bioinoculants for Promoting the Growth of Soybean (Glycine max (L.) Merrill). | Suriyachadkun C, Chunhachart O, Srithaworn M, Tangchitcharoenkhul R, Tangjitjareonkun J. | J Microbiol Biotechnol | 10.4014/jmb.2206.06058 | 2022 | | |
| Phylogeny | Streptomyces zagrosensis sp. nov., isolated from soil. | Mohammadipanah F, Hamedi J, Sproer C, Rohde M, Montero-Calasanz MDC, Klenk HP | Int J Syst Evol Microbiol | 10.1099/ijs.0.064527-0 | 2014 | |
| Phylogeny | Streptomyces palmae sp. nov., isolated from oil palm (Elaeis guineensis) rhizosphere soil. | Sujarit K, Kudo T, Ohkuma M, Pathom-Aree W, Lumyong S | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001298 | 2016 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive16142.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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