Pseudomonas marginalis (NCPPB 806, LMG 2238, ICMP 5709)

Name: Pseudomonas marginalis (NCPPB 806, LMG 2238, ICMP 5709)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161361

Type strain

Culture col. no. NCPPB 806 LMG 2238 ICMP 5709 CFBP 2038 ATCC 13889 1 more

NCBI tax ID(s) 298

Special Collections JCM

Links

Pseudomonas marginalis JCM 13460 is a mesophilic prokaryote that was isolated from Tuber of parsnip .

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 4153

LMG 2238,ATCC 13889,ICMP 5709,NCPPB 806,PDDCC 5709,CFBP 2038

@ref 20215

Last LPSN update 2025-12-16 10:08:43

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas marginalis

Full scientific name Pseudomonas marginalis (Brown 1918) Stevens 1925 (Approved Lists 1980)

Synonyms (2)

Pseudomonas panacis
"Bacterium marginale"

BacDive ID	Other strains from **Pseudomonas marginalis** (12)	Type strain
12863	P. marginalis CIBP, DSM 13124, ATCC 10844, NCPPB 667, CCUG ... (type strain)
12864	P. marginalis 289, 292, DSM 50275
137648	P. marginalis PP-5, CIP 103779, ATCC 13888, ICMP 8661, ...
141377	P. marginalis CCUG 1318, NCPPB 247
145155	P. marginalis CCUG 27768, IFO 3925, NRRL B-981, NBRC 3925
156505	P. marginalis CCUG 62222
157434	P. marginalis IMI 346520
157435	P. marginalis IMI 347520
157436	P. marginalis IMI 347524
157437	P. marginalis IMI 347528
161408	P. marginalis JCM 13886, ATCC 13890, ICMP 8660, LMG 5042, ...
161409	P. marginalis JCM 13887, ATCC 13891, ICMP 8662, LMG 5044, ...

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
67770	Tuber of parsnip (Pastinaca sativa)	Pastinaca sativa	Long Island, NY	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence LC507979 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	976
Soil Samples	555
Animal Samples	2173
Plant Samples	1759
Total Samples	5463

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Pseudomonas marginalis partial 16S rRNA gene, strain LMG 2238	HE586396	1489		298
67770	Pseudomonas marginalis JCM 13460 gene for 16S rRNA, partial sequence	LC507979	1459		298

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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