Name: Streptomyces yerevanensis DSM 43167
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16132

Type strain:

Species: Streptomyces yerevanensis

Culture col. no.: DSM 43167, ATCC 43727, CUB 297, IFO 12517, KCC A-0047, KCC A-0065, NBRC 12517, NCIB 9589, LIA 0441 (= LIA 2732/3), JCM 3047, BCRC 11564, CGMCC 4.1464, IFM 1151, IFM 1242, IMET 43616, JCM 3065, LMG 19363, NCIMB 9589, NRRL B-16943, RIA 795, VKM Ac-1234

Strain history: KCC A-0047 <-- T. Furumai <-- H. A. Lechevalier <-- LIA 0441.

NCBI tax ID(s): 66378 (species)

SI-ID 13363

LMG 19363, ATCC 43727, CCRC 11564, DSM 43167, IFO 12517, IMET 43616, JCM 3047, JCM 3065, NCIMB 9589, NRRL B-16943, VKM Ac-1234, NCIB 9589, AS 4.1464, NBRC 12517, BCRC 11564, CGMCC 4.1464

Other strains from Streptomyces yerevanensis

S. yerevanensis STH00273(ZIMET), HKI 0273
S. yerevanensis ST027411(HKI),

Section

Streptomyces yerevanensis DSM 43167 is a spore-forming, mesophilic bacterium that builds an aerial mycelium and was isolated from soil.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces yerevanensis**
	Full Scientific Name (LPSN)	Streptomyces yerevanensis Goodfellow et al. 1986

	Synonym	Microellobosporia violacea
	Synonym	"Macrospora* violaceus"*

Information on morphological and physiological properties Morphology

[Ref.: #19552]	Colony color	Violet
[Ref.: #19552]	Incubation period	10-14 days
[Ref.: #19552]	Cultivation medium used	ISP 2

[Ref.: #19552]	Colony color	Violet
[Ref.: #19552]	Incubation period	10-14 days
[Ref.: #19552]	Cultivation medium used	ISP 3

[Ref.: #19552]	Colony color	Violet
[Ref.: #19552]	Incubation period	10-14 days
[Ref.: #19552]	Cultivation medium used	ISP 4

[Ref.: #19552]	Colony color	Violet
[Ref.: #19552]	Incubation period	10-14 days
[Ref.: #19552]	Cultivation medium used	ISP 5

[Ref.: #19552]	Colony color	Violet
[Ref.: #19552]	Incubation period	10-14 days
[Ref.: #19552]	Cultivation medium used	ISP 6

[Ref.: #19552]	Colony color	Violet
[Ref.: #19552]	Incubation period	10-14 days
[Ref.: #19552]	Cultivation medium used	ISP 7

[Ref.: #19552]	Multicellular complex forming ability	yes
[Ref.: #19552]	Multicellular complex name	Aerial Mycelium
[Ref.: #19552]	Medium Name (multicellularity)	ISP 2

[Ref.: #19552]	Multicellular complex forming ability	yes
[Ref.: #19552]	Multicellular complex name	Aerial Mycelium
[Ref.: #19552]	Medium Name (multicellularity)	ISP 3

[Ref.: #19552]	Multicellular complex forming ability	yes
[Ref.: #19552]	Multicellular complex name	Aerial Mycelium
[Ref.: #19552]	Medium Name (multicellularity)	ISP 4

[Ref.: #19552]	Multicellular complex forming ability	yes
[Ref.: #19552]	Multicellular complex name	Aerial Mycelium
[Ref.: #19552]	Medium Name (multicellularity)	ISP 5

[Ref.: #19552]	Multicellular complex forming ability	no
[Ref.: #19552]	Medium Name (multicellularity)	ISP 6

[Ref.: #19552]	Multicellular complex forming ability	yes
[Ref.: #19552]	Multicellular complex name	Aerial Mycelium
[Ref.: #19552]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium

ISP 4

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 6

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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		Temperature
[Ref.: #10835]	growth	28 °C
[Ref.: #19552]	optimum	28 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #10835]	Temperature range	mesophilic
[Ref.: #19552]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #19552]	Spore description	Formation of spore chains: very short, spore surface: smooth
[Ref.: #19552]	Type of spore	spore
[Ref.: #19552]	Ability of spore formation	yes

[Ref.: #10835]	Name of produced compound	pigmented antibiotic
[Ref.: #10835]	Name of produced compound	violacin
[Ref.: #20216]	Name of produced compound	Violacin

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #19552]		NaCl		maximum	2.5	%

[Ref.: #67770]

Observation

quinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19552]	arabinose ChEBI	+
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19552]	cellulose ChEBI	-
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #19552]	fructose ChEBI	-
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19552]	glucose ChEBI	+
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #19552]	mannitol ChEBI	-
[Ref.: #19552]	myo-inositol ChEBI	-
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #19552]	raffinose ChEBI	-
[Ref.: #19552]	rhamnose ChEBI	-
[Ref.: #19552]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19552]	xylose ChEBI	+
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #68368]		acetoin ChEBI	-		* from API 20E
[Ref.: #68368]		indole ChEBI		-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19552]	405	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10835]	Sample type/isolated from	soil

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10835]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19552]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces yerevanensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 3065	D43976	120	ENA	66378 tax ID	*
[Ref.: #20218]	Streptomyces yerevanensis gene for 16S rRNA, partial sequence	AB122714	566	ENA	66378 tax ID	*
[Ref.: #20218]	Streptomyces yerevanensis gene for 16S rRNA, partial sequence, strain: NBRC 12517	AB184099	1453	ENA	66378 tax ID	*
[Ref.: #20218]	Streptomyces yerevanensis strain NRRL B-16943 16S ribosomal RNA gene, partial sequence	EF178684	1514	ENA	66378 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces yerevanensis NRRL B-16943	GCA_000716805	contig	GenBank	66378 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces yerevanensis NRRL B-16943 NCBI: GCA_000716805.1
[Ref.: #69480]	motile	no	94.679	no
[Ref.: #69480]	flagellated	no	97.691	no
[Ref.: #69480]	gram-positive	yes	89.591	no
[Ref.: #69480]	anaerobic	no	99.241	no
[Ref.: #69480]	halophile	no	93.818	no
[Ref.: #69480]	spore-forming	yes	93.926	no
[Ref.: #69480]	thermophile	no	98.404	yes
[Ref.: #69480]	glucose-util	yes	89.146	yes
[Ref.: #69480]	aerobic	yes	94.904	no
[Ref.: #69480]	glucose-ferment	no	90.27	no

Availability in culture collections External links

[Ref.: #10835]

Culture collection no.

DSM 43167, ATCC 43727, CUB 297, IFO 12517, KCC A-0047, KCC A-0065, NBRC 12517, NCIB 9589, LIA 0441 (= LIA 2732/3), JCM 3047, BCRC 11564, CGMCC 4.1464, IFM 1151, IFM 1242, IMET 43616, JCM 3065, LMG 19363, NCIMB 9589, NRRL B-16943, RIA 795, VKM Ac-1234

[Ref.: #85197]

SI-ID 13363

References

#10835

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43167

#19552

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#85197

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID13363.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces yerevanensis NRRL B-16943

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