Name: Phocaeicola massiliensis JCM 12982
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161297

Type strain:

Species: Phocaeicola massiliensis

Culture col. no.: JCM 12982

Strain history: M. Kitahara EG4-8-2.

NCBI tax ID(s): 204516 (species)

SI-ID 231855

JCM 12982

Other strains from Phocaeicola massiliensis

P. massiliensis B84634, 84634, DSM 17679, CCUG ... (type strain)

Section

Phocaeicola massiliensis JCM 12982 is a mesophilic bacterium that was isolated from Human feces.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Bacteroidaceae*
	Genus	*Phocaeicola*
	Species	**Phocaeicola massiliensis**
	Full Scientific Name (LPSN)	Phocaeicola massiliensis (Fenner et al. 2005) García-López et al. 2020

	Synonym	"Candidatus* Bacteroides massiliensis"*
	Synonym	"Candidatus* Bacteroides massiliae"*

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Human feces
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB200226 (>99% sequence identity) for Phocaeicola massiliensis subclade from Microbeatlas

Aquatic Samples	6340
Soil Samples	946
Animal Samples	152755
Plant Samples	364
Total Samples	160405

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Bacteroides massiliensis gene for 16S rRNA, partial sequence, strain: EG4-8-2	AB200226	1455	ENA	204516 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 12982

[Ref.: #113344]

SI-ID 231855

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113344

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID231855.1 )

* These data were automatically processed and therefore are not curated

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