Name: Phocaeicola coprocola JCM 12980
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161295

Type strain:

Species: Phocaeicola coprocola

Culture col. no.: JCM 12980

Strain history: M. Kitahara M11.

NCBI tax ID(s): 310298 (species)

SI-ID 231854

JCM 12980

Other strains from Phocaeicola coprocola

P. coprocola M16, DSM 17136, JCM 12979, CCUG ... (type strain)
P. coprocola JCM 12981

Section

Phocaeicola coprocola JCM 12980 is a mesophilic bacterium that was isolated from Human feces.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Bacteroidaceae*
	Genus	*Phocaeicola*
	Species	**Phocaeicola coprocola**
	Full Scientific Name (LPSN)	Phocaeicola coprocola (Kitahara et al. 2005) García-López et al. 2020

Synonym

Bacteroides coprocola

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Human feces
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB200223 (>99% sequence identity) for Phocaeicola coprocola subclade from Microbeatlas

Aquatic Samples	11373
Soil Samples	2696
Animal Samples	155260
Plant Samples	888
Total Samples	170217

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Bacteroides coprocola gene for 16S rRNA, partial sequence, strain: M11	AB200223	1491	ENA	310298 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 12980

[Ref.: #113342]

SI-ID 231854

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113342

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID231854.1 )

* These data were automatically processed and therefore are not curated

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Search for species Phocaeicola coprocola in external resources:
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