Natronolimnohabitans innermongolicus (CGMCC 1.2124, JCM 12255)

Name: Natronolimnohabitans innermongolicus (CGMCC 1.2124, JCM 12255)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161207

Type strain

Culture col. no. CGMCC 1.2124 JCM 12255

NCBI tax ID(s) 1227499 253107

Special Collections JCM

History JCM <-- T. Itoh <-- P. Zhou and H. Xin N-1311.

Links

Natronolimnohabitans innermongolicus JCM 12255 is an archaeon that was isolated from Soda lake in Inner Mongolia Autonomous Region.

genome sequence 16S sequence Archaea

Name and taxonomic classification

SI-ID 231869

JCM 12255,AS 1.2124,CGMCC 1.2124

@ref 20215

Last LPSN update 2026-05-29 08:44:37

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Natrialbaceae

Genus Natronolimnohabitans

Species Natronolimnohabitans innermongolicus

Full scientific name Natronolimnohabitans innermongolicus (Itoh et al. 2005) Sorokin et al. 2020

Synonyms (1)

Natronolimnobius innermongolicus

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	93.308

Spore formation

@ref	Spore formation	Confidence
125439		94.555

Observation

67770

Observationquinones: MK-8 and MK-8(H₂)

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Soda lake in Inner Mongolia Autonomous Region	China	CHN	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM33721v1 assembly for Natronolimnohabitans innermongolicus JCM 12255	contig	GCA_000337215	1227499.3	2529293002	1227499	53.46

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Natronolimnobius innermongolicus gene for 16S rRNA, partial sequence, strain: N-1311	AB125108	1437		253107
124043	Natronolimnobius innermongolicus gene for 16S rRNA, complete sequence, strain: JCM 12255.	AB663472	1473		253107

GC content

@ref	GC-content (mol%)	Method
67770	64.3	genome sequence analysis
67770	63.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM33721v1 assembly for Natronolimnohabitans innermongolicus JCM 12255
BV-BRC: 1227499.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	93.31	no
125439	gram_stain	BacteriaNetⓘ	negative	51.99	no
125439	spore_formation	BacteriaNetⓘ	no	94.56	no
125439	motility	BacteriaNetⓘ	yes	48.82	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Coculture of Bifidobacterium bifidum G9-1 With Butyrate-Producing Bacteria Promotes Butyrate Production.	Yokota H, Tanaka Y, Ohno H.	Microbiol Immunol	10.1111/1348-0421.13224	2025
Metabolism	Symbiotic bacteria participate in pectinolytic metabolism to enhance larval growth in Zeugodacus cucurbitae.	Chen G, Tian Z, Yue Y, Gao X, Chen H, Yang J, Ma W, Zheng D, Tan H, Zhou Z.	Pest Manag Sci	10.1002/ps.70035	2025
	Draft Genome Sequences of Type Strains of Gordonibacter faecihominis, Paraeggerthella hongkongensis, Parvibacter caecicola,Slackia equolifaciens, Slackia faecicanis, and Slackia isoflavoniconvertens.	Danylec N, Stoll DA, Dotsch A, Huch M.	Microbiol Resour Announc	10.1128/mra.01532-18	2019
Phylogeny	Molecular Detection and Phylogenetic Analysis of the alkB Gene in Klebsiella oxytoca Strains Isolated from the Gut of Tenebrio molitor.	Mupamhadzi TL, Machona O, Chidzwondo F, Mangoyi R.	ScientificWorldJournal	10.1155/2024/3350591	2024
	Gut commensals-derived succinate impels colonic inflammation in ulcerative colitis.	Dalal R, Sadhu S, Batra A, Goswami S, Dandotiya J, K V V, Yadav R, Singh V, Chaturvedi K, Kannan R, Kumar S, Kumar Y, Rathore DK, Salunke DB, Ahuja V, Awasthi A.	NPJ Biofilms Microbiomes	10.1038/s41522-025-00672-3	2025
Metabolism	Isolation and characterization of a chromium-resistant bacterium Serratia sp. Cr-10 from a chromate-contaminated site.	Zhang K, Li F.	Appl Microbiol Biotechnol	10.1007/s00253-011-3120-y	2011
	Tenebrio molitor: possible source of polystyrene-degrading bacteria.	Machona O, Chidzwondo F, Mangoyi R.	BMC Biotechnol	10.1186/s12896-021-00733-3	2022
Metabolism	In vitro fermentation of broiler cecal content: the role of lactobacilli and pH value on the composition of microbiota and end products fermentation.	Meimandipour A, Shuhaimi M, Hair-Bejo M, Azhar K, Kabeir BM, Rasti B, Yazid AM.	Lett Appl Microbiol	10.1111/j.1472-765x.2009.02674.x	2009
	Assessment of Diversity of Culturable Marine Yeasts Associated with Corals and Zoanthids in the Gulf of Thailand, South China Sea.	Kaewkrajay C, Chanmethakul T, Limtong S.	Microorganisms	10.3390/microorganisms8040474	2020
	Effects of two probiotic Lactobacillus strains on jejunal and cecal microbiota of broiler chicken under acute heat stress condition as revealed by molecular analysis of 16S rRNA genes.	Lan PT, Sakamoto M, Benno Y.	Microbiol Immunol	10.1111/j.1348-0421.2004.tb03620.x	2004
	Bacillus subtilis delivery route: effect on growth performance, intestinal morphology, cecal short-chain fatty acid concentration, and cecal microbiota in broiler chickens.	Oladokun S, Koehler A, MacIsaac J, Ibeagha-Awemu EM, Adewole DI.	Poult Sci	10.1016/j.psj.2020.10.063	2021
Metabolism	Hydroxyl radicals generated by hydrogen peroxide photolysis recondition biofilm-contaminated titanium surfaces for subsequent osteoblastic cell proliferation.	Nakamura K, Shirato M, Tenkumo T, Kanno T, Westerlund A, Ortengren U, Sasaki K, Niwano Y.	Sci Rep	10.1038/s41598-019-41126-z	2019
Pathogenicity	Influence of a probiotic soy product on fecal microbiota and its association with cardiovascular risk factors in an animal model.	Cavallini DC, Suzuki JY, Abdalla DS, Vendramini RC, Pauly-Silveira ND, Roselino MN, Pinto RA, Rossi EA.	Lipids Health Dis	10.1186/1476-511x-10-126	2011
	Photolysis of hydrogen peroxide, an effective disinfection system via hydroxyl radical formation.	Ikai H, Nakamura K, Shirato M, Kanno T, Iwasawa A, Sasaki K, Niwano Y, Kohno M.	Antimicrob Agents Chemother	10.1128/aac.00751-10	2010
	Microcella flavibacter sp. nov., isolated from marine sediment, and reclassification of Chryseoglobus frigidaquae, Chryseoglobus indicus, and Yonghaparkia alkaliphila as Microcella frigidaquae comb. nov., Microcella indica nom. nov., and Microcella alkalica nom. nov.	Xie F, Pei S, Huang X, Wang L, Kou J, Zhang G.	Antonie Van Leeuwenhoek	10.1007/s10482-021-01668-7	2021
Phylogeny	Hymenobacter frigidus sp. nov., isolated from a glacier ice core.	Gu Z, Liu Y, Xu B, Wang N, Jiao N, Shen L, Liu H, Zhou Y, Liu X, Li J, Sun J.	Int J Syst Evol Microbiol	10.1099/ijsem.0.002262	2017
Phylogeny	Vitellibacter echinoideorum sp. nov., isolated from a sea urchin (Tripneustes gratilla).	Lin SY, Hameed A, Wen CZ, Liu YC, Hsu YH, Shen FT, Lai WA, Young CC.	Int J Syst Evol Microbiol	10.1099/ijs.0.000258	2015
Phylogeny	Microbulbifer mangrovi sp. nov., a polysaccharide-degrading bacterium isolated from an Indian mangrove.	Vashist P, Nogi Y, Ghadi SC, Verma P, Shouche YS.	Int J Syst Evol Microbiol	10.1099/ijs.0.042978-0	2013
Phylogeny	Natronolimnobius baerhuensis gen. nov., sp. nov. and Natronolimnobius innermongolicus sp. nov., novel haloalkaliphilic archaea isolated from soda lakes in Inner Mongolia, China.	Itoh T, Yamaguchi T, Zhou P, Takashina T	Extremophiles	10.1007/s00792-004-0426-z	2004

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Natronolimnohabitans innermongolicus (CGMCC 1.2124, JCM 12255)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000337215

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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