Paenibacillus koleovorans (NBRC 103111, KCTC 13912, IAM 14926)

Name: Paenibacillus koleovorans (NBRC 103111, KCTC 13912, IAM 14926)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161131

Type strain

Culture col. no. NBRC 103111 KCTC 13912 IAM 14926 BCRC 17342 JCM 11186

NCBI tax ID(s) 1220568 121608

Special Collections JCM KCTC

History M. Takeda TB.

Links

Paenibacillus koleovorans JCM 11186 is a bacterium that was isolated from Soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 88306

JCM 11186,IAM 14926,KCTC 13912,NBRC 103111,BCRC 17342,LMG 24777,LMG 24744

@ref 20215

Last LPSN update 2026-02-09 11:39:04

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus koleovorans

Full scientific name Paenibacillus koleovorans Takeda et al. 2002

BacDive ID	Other strains from **Paenibacillus koleovorans** (1)	Type strain
161130	P. koleovorans JCM 11185, IAM 14927

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		90.34

Observation

67770

Observationquinones: MK-7

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67770	Soil	Kanagawa Pref.	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC107615 (>99% sequence identity) for Paenibacillus koleovorans subclade from Microbeatlas

Aquatic Samples	97
Soil Samples	1173
Animal Samples	48
Plant Samples	111
Total Samples	1429

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
67770	ASM400084v1 assembly for Paenibacillus koleovorans NBRC 103111	contig	GCA_004000845	1220568.3	1220568	17.36

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
67770	Paenibacillus sp. TB gene for 16S rRNA, partial sequence	AB041720	1363	121608
67770	Paenibacillus koleovorans gene for 16S rRNA, partial sequence, strai: JCM 11186	AB072237	599	121608
67770	Paenibacillus koleovorans gene for 16S rRNA, partial sequence, strain: NBRC 103111	AB681949	1471	121608
67770	Paenibacillus koleovorans gene for 16S ribosomal RNA, partial sequence, strain: JCM 11186	LC107615	1468	121608

GC content

@ref	GC-content (mol%)	Method
67770	54	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Paenibacillus koleovorans NBRC 103111
NCBI: GCA_004000845

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	84.80	no
125439	gram_stain	BacteriaNetⓘ	variable	83.40	no
125439	motility	BacteriaNetⓘ	yes	84.30	no
125439	spore_formation	BacteriaNetⓘ	yes	87.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenibacillus koleovorans NBRC 103111
PATRIC: 1220568.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	61.94	no
125438	anaerobic	anaerobicⓘ	no	93.67	no
125438	spore-forming	spore-formingⓘ	yes	90.34	no
125438	aerobic	aerobicⓘ	yes	74.12	no
125438	thermophilic	thermophileⓘ	no	91.43	yes
125438	flagellated	motile2+ⓘ	yes	78.78	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus koleovorans sp. nov., able to grow on the sheath of Sphaerotilus natans.	Takeda M, Kamagata Y, Shinmaru S, Nishiyama T, Koizumi J	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1597	2002

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus koleovorans (NBRC 103111, KCTC 13912, IAM 14926)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Spore formation

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_004000845

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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