Limosilactobacillus reuteri (JCM 1081)

Name: Limosilactobacillus reuteri (JCM 1081)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161074

Type strain

Culture col. no. JCM 1081

NCBI tax ID(s) 1598

Special Collections JCM

Links

Limosilactobacillus reuteri JCM 1081 is a mesophilic prokaryote that was isolated from Chicken intestine.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 63147

JCM 1081,BCRC 17476,CCRC 17476

@ref 20215

Last LPSN update 2025-12-16 10:08:38

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Limosilactobacillus

Species Limosilactobacillus reuteri

Full scientific name Limosilactobacillus reuteri (Kandler et al. 1982) Zheng et al. 2020

Synonyms (1)

Lactobacillus reuteri

BacDive ID	Other strains from **Limosilactobacillus reuteri** (17)	Type strain
6507	L. reuteri F 275, DSM 20016, ATCC 23272, CIP 109823, ... (type strain)
6506	L. reuteri 15/7, DSM 20015, CIP 109822
6508	L. reuteri F70, F 70, DSM 20053, CIP 109824
6509	L. reuteri 65 A, DSM 20056, CIP 109825
130965	L. reuteri M6220-5A, DSM 28673
130966	L. reuteri MI-2, DSM 100191
130967	L. reuteri JJM0207-8, DSM 100192
130968	L. reuteri I49, DSM 32035
158987	L. reuteri WCA-386-APC-4I, DSM 108836
160828	L. reuteri Cla-CZ-17, DSM 108983
161078	L. reuteri JCM 1084
173530	L. reuteri A23272, CRBIP24.1
173531	L. reuteri CRBIP24.2
173532	L. reuteri FF65, CRBIP24.3
173533	L. reuteri CRBIP24.42
173534	L. reuteri CRBIP24.49
177005	L. reuteri LAD4, DSM 116333

Morphology

Cell morphology

@ref	Motility	Confidence
125438		90
125438		92.05

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	microaerophile	97.6

Isolation, sampling and environmental information

Isolation

67770

Sample typeChicken intestine

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM211222v1 assembly for Limosilactobacillus reuteri JCM 1081	scaffold	GCA_002112225	1598.309	2957556509	1598	65.57

Genome browser: GCA_002112225

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Lactobacillus reuteri gene for 16S rRNA, partial sequence, strain: JCM 1081.	AB289269	609		1598

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Limosilactobacillus reuteri JCM 1081
NCBI: GCA_002112225

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	63.60	no
125439	motility	BacteriaNetⓘ	no	53.90	no
125439	gram_stain	BacteriaNetⓘ	variable	76.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	97.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus reuteri strain JCM 1081
PATRIC: 1598.309

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.05	no
125438	anaerobic	anaerobicⓘ	no	81.99	no
125438	spore-forming	spore-formingⓘ	no	82.82	no
125438	aerobic	aerobicⓘ	no	89.62	no
125438	thermophilic	thermophileⓘ	no	95.00	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Title	Authors	Journal	DOI	Year
Prophages in Lactobacillus reuteri Are Associated with Fitness Trade-Offs but Can Increase Competitiveness in the Gut Ecosystem.	Oh JH, Lin XB, Zhang S, Tollenaar SL, Ozcam M, Dunphy C, Walter J, van Pijkeren JP.	Appl Environ Microbiol	10.1128/aem.01922-19	2019
Identification and characterization of sulfated carbohydrate-binding protein from Lactobacillus reuteri.	Nishiyama K, Ochiai A, Tsubokawa D, Ishihara K, Yamamoto Y, Mukai T	PLoS One	10.1371/journal.pone.0083703	2013
Identification of a surface protein from Lactobacillus reuteri JCM1081 that adheres to porcine gastric mucin and human enterocyte-like HT-29 cells.	Wang B, Wei H, Yuan J, Li Q, Li Y, Li N, Li J	Curr Microbiol	10.1007/s00284-008-9148-2	2008
Binding of Bifidobacterium bifidum and Lactobacillus reuteri to the carbohydrate moieties of intestinal glycolipids recognized by peanut agglutinin.	Mukai T, Kaneko S, Matsumoto M, Ohori H	Int J Food Microbiol	10.1016/s0168-1605(03)00317-9	2004
Inhibition of binding of Helicobacter pylori to the glycolipid receptors by probiotic Lactobacillus reuteri.	Mukai T, Asasaka T, Sato E, Mori K, Matsumoto M, Ohori H	FEMS Immunol Med Microbiol	10.1111/j.1574-695X.2002.tb00541.x	2002
Haemagglutination and glycolipid-binding activities of Lactobacillus reuteri.	Mukai T, Kaneko S, Ohori H	Lett Appl Microbiol	10.1046/j.1472-765x.1998.00418.x	1998

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Limosilactobacillus reuteri (JCM 1081)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_002112225

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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