Lactobacillus gasseri (LMG 18176, KCTC 3143, JCM 1025)

Name: Lactobacillus gasseri (LMG 18176, KCTC 3143, JCM 1025)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160898

Type strain

Culture col. no. LMG 18176 KCTC 3143 JCM 1025

NCBI tax ID(s) 1596

Special Collections JCM KCTC

History JCM <-- T. Mitsuoka S1-71 <-- G. Reuter VC (Lactobacillus acidophilus).

Links

Lactobacillus gasseri JCM 1025 is a bacterium that was isolated from Human intestine.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 11429

LMG 18176,JCM 1025,KCTC 3143

@ref 20215

Last LPSN update 2026-05-29 08:44:33

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lactobacillus

Species Lactobacillus gasseri

Full scientific name Lactobacillus gasseri Lauer and Kandler 1980

BacDive ID	Other strains from **Lactobacillus gasseri** (119)	Type strain
6466	L. gasseri AM 63, CCUG 31451, DSM 20243, ATCC 33323, ... (type strain)
6467	L. gasseri V 4020/4079, DSM 20604
134714	L. gasseri CIP 110091
135303	L. gasseri 7G5, CIP 103614, VPI 6325
135312	L. gasseri CIP 103613, VPI 6099B
135314	L. gasseri VA 24061, CIP 103615, VPI 6322
135315	L. gasseri CIP 103616, VPI 9940
135316	L. gasseri CIP 103618, VPI 6101
135317	L. gasseri 640982638, CIP 103619
135371	L. gasseri CIP 110105
135548	L. gasseri CIP 110110
135762	L. gasseri CIP 110090
136026	L. gasseri CIP 101929
136057	L. gasseri CIP 102194
136112	L. gasseri CIP 102570
137037	L. gasseri CIP 110087
137069	L. gasseri CIP 104461
137071	L. gasseri CIP 104464
137629	L. gasseri CIP 102418
137637	L. gasseri 139-87, CIP 102874
137650	L. gasseri 61Z, CIP 103784
137651	L. gasseri 64C, 63 098 3754, CIP 103785
137946	L. gasseri CIP 102276
138040	L. gasseri CIP 102568
138665	L. gasseri CIP 110092
138685	L. gasseri CIP 104460
138807	L. gasseri CIP 103617, VPI 8832
139159	L. gasseri CIP 101909
144383	L. gasseri CCUG 24836
144572	L. gasseri CCUG 25736, LMG 10771
145070	L. gasseri CCUG 27600
145074	L. gasseri CCUG 27604
145302	L. gasseri CCUG 28121
145643	L. gasseri CCUG 29126 A
145748	L. gasseri CCUG 29472
145749	L. gasseri CCUG 29473
145750	L. gasseri CCUG 29474
145771	L. gasseri CCUG 29549 A
146268	L. gasseri CCUG 30757
146300	L. gasseri CCUG 30836
146640	L. gasseri CCUG 31694
146978	L. gasseri CCUG 32588
147566	L. gasseri CCUG 33810
147948	L. gasseri CCUG 34559
148011	L. gasseri CCUG 34667
148135	L. gasseri CCUG 34884
148528	L. gasseri CCUG 35597
148969	L. gasseri CCUG 36658
149585	L. gasseri CCUG 38013
149741	L. gasseri CCUG 38309
149742	L. gasseri CCUG 38310
150160	L. gasseri CCUG 39140
150745	L. gasseri CCUG 42155
150829	L. gasseri CCUG 42507
150977	L. gasseri CCUG 42925
151391	L. gasseri CCUG 44033
151392	L. gasseri CCUG 44034
151397	L. gasseri CCUG 44040
151403	L. gasseri CCUG 44046
151412	L. gasseri CCUG 44056
151415	L. gasseri CCUG 44059
151421	L. gasseri CCUG 44063
151422	L. gasseri CCUG 44064
151425	L. gasseri CCUG 44068
151428	L. gasseri CCUG 44071
151429	L. gasseri CCUG 44072
151431	L. gasseri CCUG 44075
151432	L. gasseri CCUG 44076
151437	L. gasseri CCUG 44081
151438	L. gasseri CCUG 44082
151439	L. gasseri CCUG 44083
151442	L. gasseri CCUG 44086
151467	L. gasseri CCUG 44112
151481	L. gasseri CCUG 44130
151484	L. gasseri CCUG 44133
151486	L. gasseri CCUG 44138
151495	L. gasseri CCUG 44150
151517	L. gasseri CCUG 44188
151542	L. gasseri CCUG 44261
151543	L. gasseri CCUG 44262
152108	L. gasseri CCUG 45815
152202	L. gasseri CCUG 46054
152371	L. gasseri CCUG 46549
152674	L. gasseri CCUG 47327
153149	L. gasseri CCUG 48585
154159	L. gasseri CCUG 52606
154737	L. gasseri CCUG 55036
154789	L. gasseri CCUG 55191
155327	L. gasseri CCUG 57346 A
155420	L. gasseri CCUG 57687
155434	L. gasseri CCUG 57751
155698	L. gasseri CCUG 59028
157744	L. gasseri D99, DSM 107525
160894	L. gasseri JCM 1019, KCTC 3139
160899	L. gasseri JCM 1026, KCTC 3144, LMG 18177, VPI 11845
160905	L. gasseri JCM 1031, KCTC 3148
161123	L. gasseri JCM 11046
161177	L. gasseri JCM 11657
165304	L. gasseri JCM 5813, KCTC 3181, LMG 18194
165305	L. gasseri JCM 5814, KCTC 3182, LMG 18195
165956	L. gasseri JCM 8787, LMG 18203
165957	L. gasseri JCM 8788
165958	L. gasseri JCM 8789
165959	L. gasseri JCM 8790
172828	L. gasseri CIMB 04-5738, CRBIP17.88
172829	L. gasseri CRBIP24.119
172830	L. gasseri 61 BH26, CRBIP24.120
172831	L. gasseri CRBIP24.127
172832	L. gasseri CRBIP24.128
172833	L. gasseri CRBIP24.136
172834	L. gasseri CRBIP24.144
172835	L. gasseri CRBIP24.152
172836	L. gasseri CRBIP24.162
172837	L. gasseri CRBIP24.172
172838	L. gasseri 61 BN1, CRBIP24.194
172839	L. gasseri CRBIP24.53
172840	L. gasseri 63 AK, CRBIP24.62
172841	L. gasseri 25-74, CRBIP24.73
172842	L. gasseri 2236, CRBIP24.79

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125438	positive	95.591
125438		92.5

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.163

Spore formation

@ref	Spore formation	Confidence
125438		93.206

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species
67770	Human intestine	Homo sapiens

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM330731v1 assembly for Lactobacillus gasseri JCM 1025	contig	GCA_003307315	1596.89	2988090818	1596	74.07

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
124043	Lactobacillus gasseri gene for 16S rRNA, partial sequence, strain: JCM 1025.	AB289130	664	1596
124043	Lactobacillus gasseri 16S ribosomal RNA, partial sequence; 16S/23S intergenic spacer region, complete sequence; and 23S ribosomal RNA partial sequence	AF182721	673	1596
124043	Lactobacillus gasseri JCM 1025 gene for 16S ribosomal RNA, partial sequence.	LC374361	1495	1596
124043	Lactobacillus gasseri JCM 1025 gene for 16S rRNA, partial sequence.	LC638729	1511	1596

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM330731v1 assembly for Lactobacillus gasseri JCM 1025
BV-BRC: 1596.89

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.16	no
125439	gram_stain	BacteriaNetⓘ	positive	78.32	no
125439	motility	BacteriaNetⓘ	no	63.44	no
125439	spore_formation	BacteriaNetⓘ	no	79.25	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lactobacillus gasseri strain JCM 1025
PATRIC: 1596.89

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	95.59	no
125438	anaerobic	anaerobicⓘ	no	72.21	no
125438	spore-forming	spore-formingⓘ	no	93.21	no
125438	aerobic	aerobicⓘ	no	97.18	no
125438	thermophilic	thermophileⓘ	no	97.00	yes
125438	flagellated	motile2+ⓘ	no	92.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Anti-Inflammation and Anti-Melanogenic Effects of Maca Root Extracts Fermented Using Lactobacillus Strains.	Yang J, Cho H, Gil M, Kim KE.	Antioxidants (Basel)	10.3390/antiox12040798	2023
	Inhibitory Effects of Fermented Sprouted Oat Extracts on Oxidative Stress and Melanin Overproduction.	Cho H, Yang J, Kang JY, Kim KE.	Antioxidants (Basel)	10.3390/antiox13050544	2024
Metabolism	Distinct Histone Modifications Modulate DEFB1 Expression in Human Vaginal Keratinocytes in Response to Lactobacillus spp.	Lee J, Jang A, Kim JW, Han JH, Chun BH, Jung HS, Jeon CO, Myung SC.	Probiotics Antimicrob Proteins	10.1007/s12602-017-9286-6	2017
Metabolism	Identification of and hydrogen peroxide production by fecal and vaginal lactobacilli isolated from Japanese women and newborn infants.	Song YL, Kato N, Matsumiya Y, Liu CX, Kato H, Watanabe K.	J Clin Microbiol	10.1128/jcm.37.9.3062-3064.1999	1999

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Lactobacillus gasseri (LMG 18176, KCTC 3143, JCM 1025)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003307315

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media