Cite this strain

"Brachybacterium massiliense" (DSM 101766, CSUR P2240, mt5)

BacDive ID 160752

Type strain

Strain Designation mt5

Culture col. no. DSM 101766 CSUR P2240 mt5

NCBI tax ID(s) 1755098

Special Collections DSMZ Cadoret human gut

Links

"Brachybacterium massiliense" mt5 is a mesophilic prokaryote that was isolated from human stool specimen from a healthy patient.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 398120

DSM 101766

@ref 20215

Last LPSN update 2025-12-16 10:08:34

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Dermabacteraceae

Genus Brachybacterium

Species "Brachybacterium massiliense"

Full scientific name Brachybacterium massiliense Mekhalif et al. 2019

Synonyms (1)

"Brachybacterium massiliense"

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	95.9

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
67680	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67680	positive	growth	37	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67680	human stool specimen from a healthy patient	Senegal	SEN	Africa

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	PRJEB13137 assembly for Brachybacterium massiliense mt5	contig	GCA_900184245	1755098.3	2865180082	1755098	69.73

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Brachybacterium massiliense mt5
NCBI: GCA_900184245

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	75.80	no
125439	motility	BacteriaNetⓘ	no	55.00	no
125439	gram_stain	BacteriaNetⓘ	positive	95.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	80.10	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Gut Bacteria Missing in Severe Acute Malnutrition, Can We Identify Potential Probiotics by Culturomics?	Tidjani Alou M, Million M, Traore SI, Mouelhi D, Khelaifia S, Bachar D, Caputo A, Delerce J, Brah S, Alhousseini D, Sokhna C, Robert C, Diallo BA, Diallo A, Parola P, Golden M, Lagier JC, Raoult D.	Front Microbiol	10.3389/fmicb.2017.00899	2017
	'Khelaifiella massiliensis', 'Niameybacter massiliensis', 'Brachybacterium massiliense', 'Enterobacter timonensis', 'Massilibacillus massiliensis', new bacterial species and genera isolated from the gut microbiota of healthy infants.	Tidjani Alou M, Cadoret F, Brah S, Diallo A, Sokhna C, Mehrej V, Lagier JC, Fournier PE, Raoult D	New Microbes New Infect	10.1016/j.nmni.2017.02.002	2017
Phylogeny	Brachybacterium massiliense sp. nov., a new bacterium isolated from stool from a healthy Senegalese child.	Mekhalif F, Tidjani Alou M, Zgheib R, Lo CI, Fournier PE, Raoult D, Lagier JC	New Microbes New Infect	10.1016/j.nmni.2019.100588	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67680	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101766
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Brachybacterium massiliense" (DSM 101766, CSUR P2240, mt5)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_900184245

Genome-based predictions

Predictions

Literature

Literature

References

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