Name: Streptomyces vinaceus Jones 8542-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16074

Type strain:

Species: Streptomyces vinaceus

Strain Designation: Jones 8542-1

Culture col. no.: DSM 40257, ATCC 11861, ATCC 25510, CBS 307.55, CBS 652.69, IFO 13098, ISP 5257, NBRC 13098, NRRL B-2285, RIA 1290, JCM 4528, CGMCC 4.0636, JCM 4091, MTCC 326, NCIMB 8852, NRRL B-1381, NRRL ISP-5257, RIA 469, RIA 591, RIA 804, VKM Ac-1708, VKM Ac-580

Strain history: KCC S-0528 <-- IFO 13098 <-- SAJ <-- ISP 5257 <-- NRRL B-2285.

NCBI tax ID(s): 1960 (species)

SI-ID 343339

CCM 3005, ATCC 11861, NRRL B-2285, ATCC 25510, IFO 13098, NCIB 8852, DSM 40257, JCM 4091, JCM 4528, NCIMB 8852, NRRL B-1381, VKM Ac-580, IFO 3391, NRRL 2285, VKM Ac-1708, HUT 6073, CBS 307.55, AS 4.636, NBRC 13098, NBRC 3391, BCRC 15109, CCRC 15109, NBIMCC 1505, NCIM 2505, CGMCC 4.0636

Other strains from Streptomyces vinaceus

S. vinaceus Jones 8542-1, DSM 40515, ATCC 27476, ... (type strain)
S. vinaceus DSM 40252, ATCC 23881, CBS 661.68, ...

Section

Streptomyces vinaceus Jones 8542-1 is a mesophilic bacterium of the family Streptomycetaceae.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces vinaceus**
	Full Scientific Name (LPSN)	Streptomyces vinaceus Jones 1952 (Approved Lists 1980)

Synonym

Streptomyces arabicus

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9411]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9411]

Culture medium growth

[Ref.: #9411]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9411]

Culture medium composition

expand / minimize

[Ref.: #9411]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9411]

Culture medium growth

[Ref.: #9411]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9411]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #9411]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9411]	Name of produced compound	vinactin
[Ref.: #9411]	Name of produced compound	vitamin B₁₂

	Metabolite production	Metabolite	Production
[Ref.: #67770]		viomycin ChEBI	yes

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence AB184310 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9411]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces sp. gene for 16S rRNA, partial sequence, strain: NBRC 13098	AB184310	1458	ENA	1931 tax ID	*
[Ref.: #20218]	Streptomyces vinaceus strain DSM 40257 16S ribosomal RNA gene, partial sequence	GU383170	779	ENA	1960 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces vinaceus NRRL ISP-5257	GCA_000717215	contig	GenBank	1960 tax ID
[Ref.: #67770]	Streptomyces sp. NRRL B-1381	GCA_000719655	contig	GenBank	1463829 tax ID
[Ref.: #66792]	Streptomyces vinaceus ATCC 11861	651716730	draft	JGI IMG/M	1960 tax ID	*
[Ref.: #66792]	Streptomyces vinaceus ATCC 11861	651716849	draft	JGI IMG/M	1960 tax ID	*

Availability in culture collections External links

[Ref.: #9411]

Culture collection no.

DSM 40257, ATCC 11861, ATCC 25510, CBS 307.55, CBS 652.69, IFO 13098, ISP 5257, NBRC 13098, NRRL B-2285, RIA 1290, JCM 4528, CGMCC 4.0636, JCM 4091, MTCC 326, NCIMB 8852, NRRL B-1381, NRRL ISP-5257, RIA 469, RIA 591, RIA 804, VKM Ac-1708, VKM Ac-580

[Ref.: #85145]

SI-ID 343339

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Roles of VioG and VioQ in the incorporation and modification of the Capreomycidine residue in the peptide antibiotic viomycin.	Fei X, Yin X, Zhang L, Zabriskie TM	J Nat Prod	10.1021/np060605u	2007	*

References

#9411

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40257

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85145

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID343339.1 )

* These data were automatically processed and therefore are not curated

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