Name: Streptomyces thermovulgaris DSM 40579
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 16052

Type strain:

Species: Streptomyces thermovulgaris

Culture col. no.: DSM 40579, ATCC 23385, CBS 180.71, CBS 774.72, IFO 13473, IFO 16609, ISP 5579, NBRC 13473, NBRC 16609, NCIM 2007, RIA 1434, JCM 4841, BCRC 15172, CGMCC 4.1470, CGMCC 4.1503, HUT 6607, IMET 43405, LMG 19341, MTCC 1824, NCIMB 10070, NRRL B-12517, NRRL B-12534, VKM Ac-1876

Strain history: KCC S-0841 <-- IFO 13473 <-- SAJ <-- ISP 5579 <-- ATCC 23385 <-- A. J. Desai NCIM 2007.

NCBI tax ID(s): 1934 (species)

SI-ID 92649

LMG 19341, ATCC 23385, DSM 40579, HUT 6607, IFO 13473, IMET 43405, JCM 4841, NCIM 2007, NCIMB 10070, NRRL B-12517, NRRL B-12534, IFO 16616, IFO 16609, VKM Ac-1876, CBS 180.71, AS 4.1470, NBRC 13473, BCRC 15172, CCRC 15172, NBRC 16609, NCIB 10070, CGMCC 4.1470, CGMCC 4.1503

Other strains from Streptomyces thermovulgaris

Section

Streptomyces thermovulgaris DSM 40579 is a thermophilic bacterium that was isolated from manured soil.

thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces thermovulgaris**
	Full Scientific Name (LPSN)	Streptomyces thermovulgaris Henssen 1957 (Approved Lists 1980)

Synonym

Streptomyces thermonitrificans

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9660]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9660]

Culture medium growth

[Ref.: #9660]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9660]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9660]			growth	45 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #9660]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #20216]

Name of produced compound

Antimicrobial activity

[Ref.: #67770]

Observation

quinones: MK-9(H₈)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9660]	Sample type/isolated from	manured soil

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Bombay
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence Z68098 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	1004
Soil Samples	2719
Animal Samples	4416
Plant Samples	1566
Total Samples	9705

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9660]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	S.thermonitrificans 16S rRNA gene	Z68098	1486	ENA	1934 tax ID	*
[Ref.: #20218]	Streptomyces thermovulgaris gene for 16S rRNA, partial sequence, strain: NBRC 16609	AB249975	1463	ENA	1934 tax ID	*
[Ref.: #20218]	Streptomyces thermovulgaris gene for 16S rRNA, partial sequence, strain: NBRC 13473	AB184429	1470	ENA	1934 tax ID	*

Availability in culture collections External links

[Ref.: #9660]

Culture collection no.

DSM 40579, ATCC 23385, CBS 180.71, CBS 774.72, IFO 13473, IFO 16609, ISP 5579, NBRC 13473, NBRC 16609, NCIM 2007, RIA 1434, JCM 4841, BCRC 15172, CGMCC 4.1470, CGMCC 4.1503, HUT 6607, IMET 43405, LMG 19341, MTCC 1824, NCIMB 10070, NRRL B-12517, NRRL B-12534, VKM Ac-1876

[Ref.: #85125]

SI-ID 92649

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces alni sp. nov., a daidzein-producing endophyte isolated from a root of Alnus nepalensis D. Don.	Liu N, Wang H, Liu M, Gu Q, Zheng W, Huang Y	Int J Syst Evol Microbiol	10.1099/ijs.0.65769-0	2009	*

References

#9660

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40579

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#85125

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92649.1 )

* These data were automatically processed and therefore are not curated

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