Streptomyces tanashiensis (DSM 40195, ATCC 23967, CBS 165.54)

Name: Streptomyces tanashiensis (DSM 40195, ATCC 23967, CBS 165.54)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16034

Type strain

Strain Designation KITA 144

Culture col. no. DSM 40195 ATCC 23967 CBS 165.54 CBS 950.68 IFO 12919 16 more

NCBI tax ID(s) 67367

Special Collections DSMZ JCM KCTC Wink compendium JMRC

History DSMZ <- E.B. Shirling, ISP <- Y. Yagisawa <- T. Hata, KITA, 144 JCM <-- KCC S-0086 <-- T. Yamaguchi (IAM 0017) <-- T. Hata 144.

Links

Streptomyces tanashiensis KITA 144 is a bacterium that produces antibiotic compounds and was isolated from soil.

antibiotic compound production genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 38303

ATCC 23967,IFO 12919,DSM 40195,JCM 4086,JCM 4671,CCRC 12641,HUT 6070,IMET 42939,VKM Ac-1892,CBS 950.68,CBS 165.64,CBS 165.54,NBRC 12919,LMG 20274,BCRC 12641,KCTC 19972,NRRL B-1920,NRRL B-1692,CGMCC 4.1924,AS 4.1924

@ref 20215

Last LPSN update 2026-05-29 08:28:41

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces tanashiensis

Full scientific name Streptomyces tanashiensis Hata et al. 1952 (Approved Lists 1980)

Synonyms (1)

Streptomyces nashvillensis

BacDive ID	Other strains from **Streptomyces tanashiensis** (2)	Type strain
16033	S. tanashiensis Kala, DSM 731, DSM 40853, NRRL 3215, UC 5063
16035	S. tanashiensis 1056, FH 1223, DSM 40883, ATCC 15238

Morphology

Cell morphology

@ref	Confidence	Gram stain
125439	93.944
125439	99.326	positive
125438	90
125438	90.171	positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9256	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9256	positive	growth	28
18556	positive	optimum	26
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	90.778
125439	obligate aerobe	98.918

Spore formation

@ref	Spore formation	Confidence
125438		92.134
125439		93.036

Compound production

@ref	Compound
9256	luteomycin
20216	Luteomycin
67770	Luteomycin

Halophily

@ref	Salt	Growth	Tested relation	Concentration
18556	NaCl	positive	maximum	5 %

Tolerance

@ref	Compound	Percentage
18556	Lysozyme	0.5

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
18556	22599 ChEBI	arabinose	+/-
68368	29016 ChEBI	arginine	+	hydrolysis	from API 20E
18556	62968 ChEBI	cellulose	-
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
18556	28757 ChEBI	fructose	-
68368	5291 ChEBI	gelatin	+	hydrolysis	from API 20E
18556	17234 ChEBI	glucose	+
68368	25094 ChEBI	lysine	+	degradation	from API 20E
18556	29864 ChEBI	mannitol	-
18556	17268 ChEBI	myo-inositol	-
68368	18257 ChEBI	ornithine	+	degradation	from API 20E
18556	16634 ChEBI	raffinose	-
18556	26546 ChEBI	rhamnose	-
18556	17992 ChEBI	sucrose	-
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
18556	18222 ChEBI	xylose	+

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68368	15688 ChEBI	acetoin	+		from API 20E
68368	35581 ChEBI	indole		-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68368	arginine dihydrolase	+	3.5.3.6	from API 20E
68368	beta-galactosidase	+	3.2.1.23	from API 20E
68368	gelatinase	+		from API 20E
68368	lysine decarboxylase	+	4.1.1.18	from API 20E
68368	ornithine decarboxylase	+	4.1.1.17	from API 20E
68368	tryptophan deaminase	+	4.1.99.1	from API 20E
68368	urease	+	3.5.1.5	from API 20E

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18556	+	+	+	+	-	+	+	+	-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
9256	soil		Japan	JPN	Asia
67770	Cultivated soil	Tanashi, Tokyo	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB184245 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	286
Soil Samples	2441
Animal Samples	1009
Plant Samples	294
Total Samples	4030

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9256	1	Risk group (German classification) According to TRBA 466
18556	1	German classification According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1464889v1 assembly for Streptomyces tanashiensis JCM 4086	scaffold	GCA_014648895	67367.3	2989913908	67367	66.47

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces tanashiensis strain IFO 12919 16S ribosomal RNA gene, partial sequence	AY999856	1419	67367
20218	Streptomyces tanashiensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4671	D44299	120	67367
20218	Streptomyces tanashiensis 16S rRNA gene, type strain LMG 20274	AJ781362	1478	67367
20218	Streptomyces tanashiensis gene for 16S rRNA, partial sequence, strain: NBRC 12919	AB184245	1481	67367
124043	Streptomyces tanashiensis strain JCM 4086 16S ribosomal RNA gene, partial sequence.	MT760479	1316	67367

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1464889v1 assembly for Streptomyces tanashiensis JCM 4086
NCBI: GCA_014648895

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.92	no
125439	motility	BacteriaNetⓘ	no	93.94	no
125439	gram_stain	BacteriaNetⓘ	positive	99.33	no
125439	spore_formation	BacteriaNetⓘ	yes	93.04	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces tanashiensis JCM 4086
NCBI: GCA_014648895.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.17	no
125438	anaerobic	anaerobicⓘ	no	97.35	no
125438	aerobic	aerobicⓘ	yes	90.78	no
125438	spore-forming	spore-formingⓘ	yes	92.13	no
125438	thermophilic	thermophileⓘ	no	97.50	yes
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Isolation and Evaluation of Streptomyces melanogenes YBS22 with Potential Application for Biocontrol of Rice Blast Disease.	Song L, Wang F, Liu C, Guan Z, Wang M, Zhong R, Xi H, Zhao Y, Wen C.	Microorganisms	10.3390/microorganisms11122988	2023
	Accumulation of a bioactive benzoisochromanequinone compound kalafungin by a wild type antitumor-medermycin-producing streptomycete strain.	Lu J, He Q, Huang L, Cai X, Guo W, He J, Zhang L, Li A.	PLoS One	10.1371/journal.pone.0117690	2015
Enzymology	Kalafungin, a new antibiotic produced by Streptomyces tanashiensis strain Kala.	Johnson LE, Dietz A.	Appl Microbiol	10.1128/am.16.12.1815-1821.1968	1968
Genetics	A combination of genome mining with OSMAC strategy facilitates the discovery of bioactive metabolites produced from termite-associated Streptomyces tanashiensis BYF-112.	Wu J, Wang Y, Wang Y, Li X, Li Y, Zhang M, Xiong J, Yin C, Zhang S, Liu X, Zhang Y.	Pest Manag Sci	10.1002/ps.8640	2025
	Antibacterial and cytotoxic metabolites produced by Streptomyces tanashiensis BYF-112 isolated from Odontotermes formosanus.	Wu J, Song T, Zhang L, Huang Z, Huang F, Yin C, Zhang S, Liu X, Zhang Y.	Chin J Nat Med	10.1016/s1875-5364(24)60720-x	2024
	Fatty acid based antimicrobials from Streptomyces sp. SORS-24, an endophyte isolated from Sonchus oleraceus.	Tanvir R, Sajid I, Rehman Y, Hasnain S.	Lett Appl Microbiol	10.1093/lambio/ovad080	2023
	Pigments of aminophenoxazinones and viridomycins produced by termite-associated Streptomyces tanashiensis BYF-112.	Zhang S, Wu J, Jiang Z, Zhang L, Song T, Liu X, Yin C, Zhang Y.	Front Microbiol	10.3389/fmicb.2022.1110811	2022
	Medermycin Inhibits TNFalpha-Promoted Inflammatory Reaction in Human Synovial Fibroblasts.	Inoue S, Inahashi Y, Itakura M, Inoue G, Muneshige K, Hirose T, Iwatsuki M, Takaso M, Miyagi M, Uchida K.	Int J Mol Sci	10.3390/ijms241813871	2023
	Force-enhanced sensitive and specific detection of DNA-intercalative agents directly from microorganisms at single-molecule level.	Liu T, Cai T, Huo J, Liu H, Li A, Yin M, Mei Y, Zhou Y, Fan S, Lu Y, Wan L, You H, Cai X.	Nucleic Acids Res	10.1093/nar/gkae746	2024
	Assessing Normandy Soil Microbial Diversity for Antibacterial Activities Using Traditional Culture and iChip Methods.	Perrier F, Morice J, Gueulle S, Gery A, Riboulet-Bisson E, Garon D, Muller C, Desriac F.	Microorganisms	10.3390/microorganisms12122422	2024
	Antibacterial and Antitumor Potential of Actinomycetes Isolated from Mangrove Soil in the Maowei Sea of the Southern Coast of China.	Gong B, Chen S, Lan W, Huang Y, Zhu X.	Iran J Pharm Res		2018
	Actinobacteria Community and Their Antibacterial and Cytotoxic Activity on the Weizhou and Xieyang Volcanic Islands in the Beibu Gulf of China.	Wang L, Peng C, Gong B, Yang Z, Song J, Li L, Xu L, Yue T, Wang X, Yang M, Xu H, Liu X.	Front Microbiol	10.3389/fmicb.2022.911408	2022
Genetics	Discovery of novel secondary metabolites encoded in actinomycete genomes through coculture.	Kim JH, Lee N, Hwang S, Kim W, Lee Y, Cho S, Palsson BO, Cho BK.	J Ind Microbiol Biotechnol	10.1093/jimb/kuaa001	2021
	Desferrioxamine E produced by Streptomyces griseus stimulates growth and development of Streptomyces tanashiensis.	Yamanaka K, Oikawa H, Ogawa HO, Hosono K, Shinmachi F, Takano H, Sakuda S, Beppu T, Ueda K.	Microbiology (Reading)	10.1099/mic.0.28139-0	2005
Metabolism	Structural analysis of Mycobacterium tuberculosis M13 metalloprotease Zmp1 open states.	Liang WG, Mancl JM, Zhao M, Tang WJ.	Structure	10.1016/j.str.2020.12.002	2021
	Phosphoramidon inhibits the integral membrane protein zinc metalloprotease ZMPSTE24.	Goblirsch BR, Arachea BT, Councell DJ, Wiener MC.	Acta Crystallogr D Struct Biol	10.1107/s2059798318003431	2018
	Production of the new antibiotic tetrahydrokalafungin by transformants of the kalafungin producer Streptomyces tanashiensis.	Kakinuma S, Ikeda H, Takada Y, Tanaka H, Hopwood DA, Omura S.	J Antibiot (Tokyo)	10.7164/antibiotics.48.484	1995
Phylogeny	Studies on new antitumor antibiotics, leptofuranins A, B, C and D.I. Taxonomy, fermentation, isolation and biological activities.	Hayakawa Y, Sohda K, Furihata K, Kuzuyama T, Shin-ya K, Seto H.	J Antibiot (Tokyo)	10.7164/antibiotics.49.974	1996
Metabolism	Butenolides from Streptomyces albus J1074 Act as External Signals To Stimulate Avermectin Production in Streptomyces avermitilis.	Nguyen TB, Kitani S, Shimma S, Nihira T.	Appl Environ Microbiol	10.1128/aem.02791-17	2018
Metabolism	Biosynthesis of kalafungin in Streptomyces tanashiensis.	Kakinuma S, Ikeda H, Omura S, Hopwood DA.	J Antibiot (Tokyo)	10.7164/antibiotics.43.391	1990
Pathogenicity	Effective Antibiofilm Polyketides against Staphylococcus aureus from the Pyranonaphthoquinone Biosynthetic Pathways of Streptomyces Species.	Oja T, San Martin Galindo P, Taguchi T, Manner S, Vuorela PM, Ichinose K, Metsa-Ketela M, Fallarero A.	Antimicrob Agents Chemother	10.1128/aac.00991-15	2015
Enzymology	Isolation of cytotoxic substance, kalafungin from an alkalophilic actinomycete, Nocardiopsis dassonvillei subsp. prasina.	Tsujibo H, Sakamoto T, Miyamoto K, Kusano G, Ogura M, Hasegawa T, Inamori Y.	Chem Pharm Bull (Tokyo)	10.1248/cpb.38.2299	1990
Enzymology	Structure of gentlyase, the neutral metalloprotease of Paenibacillus polymyxa.	Ruf A, Stihle M, Benz J, Schmidt M, Sobek H.	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444912041169	2013
Phylogeny	Lactoquinomycin, a novel anticancer antibiotic. I. Taxonomy, isolation and biological activity.	Tanaka N, Okabe T, Isono F, Kashiwagi M, Nomoto K, Takahashi M, Shimazu A, Nishimura T.	J Antibiot (Tokyo)	10.7164/antibiotics.38.1327	1985
Enzymology	Phenacein--an angiotensin-converting enzyme inhibitor produced by a streptomycete. II. Isolation, structure determination and synthesis.	Liu WC, Parker WL, Brandt SS, Atwal KS, Ruby EP.	J Antibiot (Tokyo)	10.7164/antibiotics.37.1313	1984
Metabolism	Phenacein--an angiotensin-converting enzyme inhibitor produced by a streptomycete. I. Taxonomy, fermentation and biological properties.	Bush K, Henry PR, Souser-Woehleke M, Trejo WH, Slusarchyk DS.	J Antibiot (Tokyo)	10.7164/antibiotics.37.1308	1984
Enzymology	Crystal structure of Mycobacterium tuberculosis zinc-dependent metalloprotease-1 (Zmp1), a metalloprotease involved in pathogenicity.	Ferraris DM, Sbardella D, Petrera A, Marini S, Amstutz B, Coletta M, Sander P, Rizzi M.	J Biol Chem	10.1074/jbc.m111.271809	2011
	Opening up the Toolbox: Synthesis and Mechanisms of Phosphoramidates.	Itumoh EJ, Data S, Leitao EM.	Molecules	10.3390/molecules25163684	2020
Metabolism	Pleiotropic role of the Sco1/SenC family copper chaperone in the physiology of Streptomyces.	Fujimoto M, Yamada A, Kurosawa J, Kawata A, Beppu T, Takano H, Ueda K.	Microb Biotechnol	10.1111/j.1751-7915.2011.00319.x	2012
Metabolism	Polyphenol oxidase activity expression in Ralstonia solanacearum.	Hernandez-Romero D, Solano F, Sanchez-Amat A.	Appl Environ Microbiol	10.1128/aem.71.11.6808-6815.2005	2005
Genetics	Genome-based classification of Streptomyces anatolicus sp. nov., an actinobacterium with antimicrobial and cytotoxic activities, and reclassification of Streptomyces nashvillensis as a later heterotypic synonym of Streptomyces tanashiensis.	Ates H, Saygin H, Cora M, Kilic AO, Ay H.	Antonie Van Leeuwenhoek	10.1007/s10482-023-01864-7	2023
Phylogeny	Characterization of Streptomyces nymphaeiformis sp. nov., and its taxonomic relatedness to other polyhydroxybutyrate-degrading streptomycetes.	Hix GR, Khan MS, Miller MT, Napier EC, O'Brien AL, White RP, Baron SF	Int J Syst Evol Microbiol	10.1099/ijsem.0.005266	2022

References

#9256	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40195
#18556	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces tanashiensis (DSM 40195, ATCC 23967, CBS 165.54)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Halophily

Tolerance

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014648895

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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