Pseudomonas hydrolytica (DSM 106702, CCTCC AB 2018053, DSWY01)

Name: Pseudomonas hydrolytica (DSM 106702, CCTCC AB 2018053, DSWY01)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160316

Type strain

Strain Designation DSWY01

Culture col. no. DSM 106702 CCTCC AB 2018053 DSWY01

NCBI tax ID(s) 2493633

Special Collections DSMZ

History DSMZ <- S. Zhou and Y. Wang, School of Life Sciences, Northeast Normal University, Changchun, P.R. China; DSWY01

Links

Pseudomonas hydrolytica DSWY01 is a bacterium that was isolated from soil.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 402411

DSM 106702

@ref 20215

Last LPSN update 2026-05-29 08:44:24

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas hydrolytica

Full scientific name Pseudomonas hydrolytica Zhou et al. 2020

Synonyms (1)

Ectopseudomonas hydrolytica

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	99.815
125439		91.814
125438	negative	99.5
125438		91.049

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
67219	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
67219	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
67219	TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545)	Medium recipe at MediaDive	Name: TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545) Composition: Casein peptone 17.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l D(+)-Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
67219	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	92.031

Spore formation

@ref	Spore formation	Confidence
125439		99.96

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
67219	soil	Jilin Province, Changchun	China	CHN	Asia	44.4667	125.583 44.4667/125.583

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2149534v2 assembly for Ectopseudomonas hydrolytica DSWY01	complete	GCA_021495345	2493633.4	8118092441	2493633	82.36
66792	ASM412373v1 assembly for Ectopseudomonas hydrolytica DSWY01	contig	GCA_004123735	2493633.3		2493633	0

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2149534v2 assembly for Ectopseudomonas hydrolytica DSWY01
NCBI: GCA_021495345

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	87.21	no
125439	gram_stain	BacteriaNetⓘ	negative	99.82	no
125439	motility	BacteriaNetⓘ	yes	91.81	no
125439	spore_formation	BacteriaNetⓘ	no	99.96	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas hydrolytica DSWY01
NCBI: GCA_021495345.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.50	no
125438	anaerobic	anaerobicⓘ	no	96.19	no
125438	aerobic	aerobicⓘ	yes	92.03	no
125438	spore-forming	spore-formingⓘ	no	89.01	no
125438	thermophilic	thermophileⓘ	no	98.49	yes
125438	flagellated	motile2+ⓘ	yes	91.05	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Validation List no. 219. Valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006452	2024
Phylogeny	Phylogenomics studies and molecular markers reliably demarcate genus Pseudomonas sensu stricto and twelve other Pseudomonadaceae species clades representing novel and emended genera.	Rudra B, Gupta RS.	Front Microbiol	10.3389/fmicb.2023.1273665	2023
Enzymology	Two Extracellular Poly(epsilon-caprolactone)-Degrading Enzymes From Pseudomonas hydrolytica sp. DSWY01(T): Purification, Characterization, and Gene Analysis.	Li L, Lin X, Bao J, Xia H, Li F	Front Bioeng Biotechnol	10.3389/fbioe.2022.835847	2022
Phylogeny	Pseudomonas hydrolytica sp. nov., multiple polymer-degrading bacteria isolated from soil in China.	Zhou S, Wang Y, Xia H, Liu D, Chen S, Li F	Int J Syst Evol Microbiol	10.1099/ijsem.0.004129	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67219	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 106702
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Pseudomonas hydrolytica (DSM 106702, CCTCC AB 2018053, DSWY01)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_021495345

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media