Clostridium muellerianum (DSM 111390, P21, NCIMB 15261)

Name: Clostridium muellerianum (DSM 111390, P21, NCIMB 15261)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160014

Type strain

Strain Designation P21

Culture col. no. DSM 111390 P21 NCIMB 15261

NCBI tax ID(s) 2716538

Special Collections DSMZ

History <- R. S. Tanner, University of Oklahoma, Norman, USA; P21

Links

Clostridium muellerianum P21 is a bacterium that was isolated from Soil and old hay.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 401609

NCIMB 15261,DSM 111390

@ref 20215

Last LPSN update 2026-02-09 11:38:47

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium muellerianum

Full scientific name Clostridium muellerianum Doyle et al. 2022

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66918	PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)		Medium recipe at MediaDive	Name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
66918	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	anaerobe	96.8

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
66918	Soil and old hay	Oklahoma, Stillwater	USA	USA	North America	36.118	-97.0875 36.118/-97.0875

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1292652v1 assembly for Clostridium muellerianum P21	scaffold	GCA_012926525	2716538.6	3005924771	2716538	63.68

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66918	Clostridium muellerianum strain P21 16S ribosomal RNA gene, partial sequence	MT176110	1421		2716538

GC content

@ref	GC-content (mol%)	Method
66918	29.4	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Clostridium muellerianum P21
NCBI: GCA_012926525

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	74.00	no
125439	motility	BacteriaNetⓘ	yes	72.90	no
125439	gram_stain	BacteriaNetⓘ	positive	75.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	96.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Clostridium sp. P21 P21
NCBI: GCA_012926525.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	55.68	no
125438	anaerobic	anaerobicⓘ	yes	82.33	no
125438	aerobic	aerobicⓘ	no	93.83	no
125438	spore-forming	spore-formingⓘ	yes	80.66	no
125438	thermophilic	thermophileⓘ	no	90.06	yes
125438	flagellated	motile2+ⓘ	yes	76.22	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Excessive Extracellular Ammonium Production by a Free-Living Nitrogen-Fixing Soil Clostridium sp. Strain.	Park S, Jang J.	Microorganisms	10.3390/microorganisms12122634	2024
	Low electric current in a bioelectrochemical system facilitates ethanol production from CO using CO-enriched mixed culture.	Im C, Kim M, Kim JR, Valgepea K, Modin O, Nygard Y, Franzen CJ.	Front Microbiol	10.3389/fmicb.2024.1438758	2024
Enzymology	Synergy and competition during the anaerobic degradation of N-acetylglucosamine in a methane-emitting, subarctic, pH-neutral fen.	Kujala K, Schmidt O, Horn MA.	Front Microbiol	10.3389/fmicb.2024.1428517	2024
Phylogeny	Clostridium muellerianum sp. nov., a carbon monoxide-oxidizing acetogen isolated from old hay.	Doyle DA, Smith PR, Lawson PA, Tanner RS	Int J Syst Evol Microbiol	10.1099/ijsem.0.005297	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66918	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111390
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Clostridium muellerianum (DSM 111390, P21, NCIMB 15261)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_012926525

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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