Name: Piscinibacter caeni MQ-18
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 159877

Type strain:

Species: Piscinibacter caeni

Strain Designation: MQ-18

Culture col. no.: CCTCC AB 2017223, JCM 32138

Strain history: D.-Z. Chen; Zhejiang Univ. of Technol., China; MQ-18.

NCBI tax ID(s): 1861917 (species)

Special Collections

Section

Piscinibacter caeni MQ-18 is an aerobe, Gram-negative, motile bacterium that was isolated from activated sludge of a pharmaceutical factory.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	[Burkholderiales, not assigned to family]
	Genus	*Piscinibacter*
	Species	**Piscinibacter caeni**
	Full Scientific Name (LPSN)	Piscinibacter caeni Chen et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #66628]	Gram stain	negative

[Ref.: #66628]	Cell length	1.9-2.7 µm

[Ref.: #66628]	Cell width	0.5-0.75 µm

[Ref.: #66628]	Cell shape	rod-shaped

[Ref.: #66628]	Motility	yes

[Ref.: #66628]	Flagellum arrangement	polar

[Ref.: #66628]	Colony color	yellow
[Ref.: #66628]	Cultivation medium used	R2A medium

Information on culture and growth conditions Culture and growth conditions

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Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

		Temperature
[Ref.: #66628]	optimum	30 °C
[Ref.: #66628]	growth	20-40 °C
[Ref.: #67770]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #66628]			optimum	7
[Ref.: #66628]			growth	6.0-9.0

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Ability of spore formation

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Halophily / tolerance level

non-halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66628]		NaCl		growth	0-0.8	%(w/v)
[Ref.: #66628]		NaCl		optimum	0	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66628]	(S)-lactate ChEBI	+	carbon source
[Ref.: #66628]	2-oxobutanoate ChEBI	+	carbon source
[Ref.: #66628]	2-oxoglutarate ChEBI	+	carbon source
[Ref.: #66628]	3-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #66628]	3-O-methyl-D-glucose ChEBI	-	carbon source
[Ref.: #66628]	4-hydroxyphenylacetic acid ChEBI	-	carbon source
[Ref.: #66628]	acetic acid ChEBI	+	carbon source
[Ref.: #66628]	acetoacetate ChEBI	-	carbon source
[Ref.: #66628]	adipate ChEBI	-	assimilation
[Ref.: #66628]	alpha-D-glucose ChEBI	+	carbon source
[Ref.: #66628]	alpha-hydroxybutyrate	+	carbon source
[Ref.: #66628]	aztreonam ChEBI	+	carbon source
[Ref.: #66628]	bromosuccinate ChEBI	+	carbon source
[Ref.: #66628]	cellobiose ChEBI	+	carbon source
[Ref.: #66628]	cellulose ChEBI	-	hydrolysis
[Ref.: #66628]	citric acid ChEBI	-	carbon source
[Ref.: #66628]	D-arabitol ChEBI	+	carbon source
[Ref.: #66628]	D-aspartate ChEBI	-	carbon source
[Ref.: #66628]	D-fructose ChEBI	+	carbon source
[Ref.: #66628]	D-fructose 6-phosphate ChEBI	-	carbon source
[Ref.: #66628]	D-fucose ChEBI	-	carbon source
[Ref.: #66628]	D-galactose ChEBI	-	carbon source
[Ref.: #66628]	D-galacturonic acid ChEBI	-	carbon source
[Ref.: #66628]	D-glucarate ChEBI	+	carbon source
[Ref.: #66628]	D-glucose ChEBI	+	assimilation
[Ref.: #66628]	D-glucose 6-phosphate ChEBI	-	carbon source
[Ref.: #66628]	D-glucuronate ChEBI	-	carbon source
[Ref.: #66628]	D-glucuronate ChEBI	+	carbon source
[Ref.: #66628]	D-malate ChEBI	+	carbon source
[Ref.: #66628]	D-mannitol ChEBI	+	assimilation
[Ref.: #66628]	D-mannitol ChEBI	+	carbon source
[Ref.: #66628]	D-mannose ChEBI	+	assimilation
[Ref.: #66628]	D-mannose ChEBI	+	carbon source
[Ref.: #66628]	D-serine ChEBI	-	carbon source
[Ref.: #66628]	D-sorbitol ChEBI	+	carbon source
[Ref.: #66628]	D-trehalose ChEBI	+	carbon source
[Ref.: #66628]	decanoate ChEBI	-	assimilation
[Ref.: #66628]	dextrin ChEBI	+	carbon source
[Ref.: #66628]	esculin ChEBI	+	hydrolysis
[Ref.: #66628]	formate ChEBI	-	carbon source
[Ref.: #66628]	fusidate ChEBI	-	carbon source
[Ref.: #66628]	galactarate ChEBI	-	carbon source
[Ref.: #66628]	gamma-aminobutyric acid ChEBI	+	carbon source
[Ref.: #66628]	gelatin ChEBI	-	carbon source
[Ref.: #66628]	gelatin ChEBI	+	hydrolysis
[Ref.: #66628]	gentiobiose ChEBI	-	carbon source
[Ref.: #66628]	gluconate ChEBI	-	assimilation
[Ref.: #66628]	glucose ChEBI	-	fermentation
[Ref.: #66628]	glucuronamide ChEBI	-	carbon source
[Ref.: #66628]	glycerol ChEBI	+	carbon source
[Ref.: #66628]	glycine-proline ChEBI	-	carbon source
[Ref.: #66628]	guanidinium chloride ChEBI	-	carbon source
[Ref.: #66628]	inosine ChEBI	-	carbon source
[Ref.: #66628]	L-alanine ChEBI	+	carbon source
[Ref.: #66628]	L-arabinose ChEBI	+/-	assimilation
[Ref.: #66628]	L-arginine ChEBI	-	carbon source
[Ref.: #66628]	L-aspartate ChEBI	-	carbon source
[Ref.: #66628]	L-fucose ChEBI	+	carbon source
[Ref.: #66628]	L-galactonic acid gamma-lactone ChEBI	-	carbon source
[Ref.: #66628]	L-glutamate ChEBI	+	carbon source
[Ref.: #66628]	L-histidine ChEBI	-	carbon source
[Ref.: #66628]	L-malate ChEBI	+	carbon source
[Ref.: #66628]	L-pyroglutamic acid ChEBI	-	carbon source
[Ref.: #66628]	L-rhamnose ChEBI	+	carbon source
[Ref.: #66628]	L-serine ChEBI	-	carbon source
[Ref.: #66628]	lactose ChEBI	-	carbon source
[Ref.: #66628]	lincomycin ChEBI	+	carbon source
[Ref.: #66628]	lithium chloride ChEBI	-	carbon source
[Ref.: #66628]	malate ChEBI	-	assimilation
[Ref.: #66628]	maltose ChEBI	+	assimilation
[Ref.: #66628]	maltose ChEBI	+	carbon source
[Ref.: #66628]	melibiose ChEBI	-	carbon source
[Ref.: #66628]	methyl (R)-lactate ChEBI	+	carbon source
[Ref.: #66628]	methyl beta-D-glucopyranoside ChEBI	+	carbon source
[Ref.: #66628]	methyl pyruvate ChEBI	-	carbon source
[Ref.: #66628]	minocycline ChEBI	+	carbon source
[Ref.: #66628]	myo-inositol ChEBI	+	carbon source
[Ref.: #66628]	N-acetyl-D-mannosamine ChEBI	-	carbon source
[Ref.: #66628]	N-acetylgalactosamine ChEBI	-	carbon source
[Ref.: #66628]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #66628]	N-acetylglucosamine ChEBI	-	carbon source
[Ref.: #66628]	n-acetylneuraminate ChEBI	-	carbon source
[Ref.: #66628]	nalidixic acid ChEBI	+	carbon source
[Ref.: #66628]	niaproof ChEBI	-	carbon source
[Ref.: #66628]	nitrate ChEBI	+	reduction
[Ref.: #66628]	pectin ChEBI	+	carbon source
[Ref.: #66628]	phenylacetate ChEBI	-	assimilation
[Ref.: #66628]	potassium tellurite ChEBI	+	carbon source
[Ref.: #66628]	propionate ChEBI	-	carbon source
[Ref.: #66628]	quinate ChEBI	+	carbon source
[Ref.: #66628]	raffinose ChEBI	-	carbon source
[Ref.: #66628]	rifamycin sv ChEBI	+	carbon source
[Ref.: #66628]	salicin ChEBI	+	carbon source
[Ref.: #66628]	sodium bromate ChEBI	-	carbon source
[Ref.: #66628]	sodium butyrate ChEBI	-	carbon source
[Ref.: #66628]	sodium citrate ChEBI	-	assimilation
[Ref.: #66628]	stachyose ChEBI	-	carbon source
[Ref.: #66628]	starch ChEBI	+	hydrolysis
[Ref.: #66628]	sucrose ChEBI	+	carbon source
[Ref.: #66628]	tetrazolium blue ChEBI	-	carbon source
[Ref.: #66628]	tetrazolium violet ChEBI	+	carbon source
[Ref.: #66628]	troleandomycin ChEBI	-	carbon source
[Ref.: #66628]	turanose ChEBI	+	carbon source
[Ref.: #66628]	tween 20 ChEBI	+	hydrolysis
[Ref.: #66628]	tween 40 ChEBI	+	carbon source
[Ref.: #66628]	tween 80 ChEBI	+	hydrolysis
[Ref.: #66628]	vancomycin ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #66628]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #66628]	acid phosphatase	+	3.1.3.2
[Ref.: #66628]	alkaline phosphatase	-	3.1.3.1
[Ref.: #66628]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #66628]	alpha-galactosidase	-	3.2.1.22
[Ref.: #66628]	alpha-glucosidase	+	3.2.1.20
[Ref.: #66628]	alpha-mannosidase	-	3.2.1.24
[Ref.: #66628]	arginine dihydrolase	-	3.5.3.6
[Ref.: #66628]	beta-D-fucosidase	-	3.2.1.38
[Ref.: #66628]	beta-galactosidase	+	3.2.1.23
[Ref.: #66628]	beta-glucosidase	+	3.2.1.21
[Ref.: #66628]	beta-glucuronidase	-	3.2.1.31
[Ref.: #66628]	catalase	+	1.11.1.6
[Ref.: #66628]	cystine arylamidase	-	3.4.11.3
[Ref.: #66628]	cytochrome oxidase	+	1.9.3.1
[Ref.: #66628]	esterase (C 4)	+
[Ref.: #66628]	esterase Lipase (C 8)	-
[Ref.: #66628]	leucine arylamidase	-	3.4.11.1
[Ref.: #66628]	lipase (C 14)	-
[Ref.: #66628]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #66628]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #66628]	trypsin	-	3.4.21.4
[Ref.: #66628]	urease	-	3.5.1.5
[Ref.: #66628]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66628]	Sample type/isolated from	activated sludge of a pharmaceutical factory
[Ref.: #66628]	Geographic location (country and/or sea, region)	Zhejiang
[Ref.: #66628]	Country	China
[Ref.: #66628]	Country ISO 3 Code	CHN
[Ref.: #66628]	Continent	Asia
[Ref.: #66628]	Enrichment culture	R2A
[Ref.: #66628]	Enrichment culture composition	0.5 g/l proteose peptone, 0.5 g/l casamino acids, 0.5 g/l soluble starch, 0.5 g/l yeast extract, 0.5 g/l dextrose, 0.3 g/l dipotassium phosphate, 0.05 g/l magnesium sulfate heptahydrate, 0.3 g/l sodium pyruvate, 15 g/l agar.
[Ref.: #66628]	Enrichment culture duration	4 days
[Ref.: #66628]	Enrichment culture temperature	30 ̊C
[Ref.: #66628]	Isolation/enrichment procedure	1 ml activated sludge was first cultivated in 50 ml distilled water for 3 days. Next, the solutionwas diluted and spread on R2A agar.

[Ref.: #67770]	Sample type/isolated from	Activated sludge from a pharmaceutical factory in Zhejiang
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	#Activated sludge
#Engineered	#Industrial	#Plant (Factory)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66628]	Piscinibacter caeni strain MQ-18 16S ribosomal RNA gene, partial sequence	KX390668	1445	GenBank ENA	1861917 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Piscinibacter caeni MQ-18	GCA_003265685	scaffold	GenBank ENA	1861917 tax ID
[Ref.: #66792]	Piscinibacter caeni MQ-18	2883124827	draft	JGI IMG/M	1861917 tax ID	*

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GC-content

70.10 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #66628]

Culture collection no.

CCTCC AB 2017223, JCM 32138

Literature:

	Title	Authors	Journal	DOI	Year
Phylogeny	Piscinibacter caeni sp. nov., isolated from activated sludge.	Chen DZ, Yu NN, Chu QY, Chen J, Ye JX, Cheng ZW, Zhang SH, Chen JM	Int J Syst Evol Microbiol	10.1099/ijsem.0.002891	2018	*
	Interaction of tetrahydrofuran and methyl tert-butyl ether in waste gas treatment by a biotrickling filter bioaugmented with Piscinibacter caeni MQ-18 and Pseudomonas oleovorans DT4.	Liu HY, Yang GF, Cheng ZW, Chu QY, Xu YF, Zhang WX, Ye JX, Chen JM, Wang LN, Yang ZY, Tang ZQ, Chen DZ	Chemosphere	10.1016/j.chemosphere.2021.131552	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66628

Dong-Zhi Chen, Ning-Ning Yu, Qi-Ying Chu, Jing Chen, Jie-Xu Ye, Zhuo-Wei Cheng, Shi-Han Zhang and Jian-Meng Chen: Piscinibacter caeni sp. nov., isolated from activated sludge. IJSEM 68: 2627 - 2632 2018 ( DOI 10.1099/ijsem.0.002891 , PubMed 29957173 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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