Name: Ignatzschineria cameli UAE-HKU57
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 159851

Type strain:

Species: Ignatzschineria cameli

Strain Designation: UAE-HKU57

Culture col. no.: CCOS 1165, NBRC 113042

NCBI tax ID(s): 2182793 (species)

Special Collections

Literature strains

Section

When using BacDive for research please cite our paper

Ignatzschineria cameli UAE-HKU57 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from the foot necrotic tissue of a dromedary with squamous cell carcinoma with secondary inflammation.

colony-forming
Gram-negative
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Cardiobacteriales*
	Family	*Ignatzschineriaceae*
	Genus	*Ignatzschineria*
	Species	**Ignatzschineria cameli**
	Full Scientific Name (LPSN)	Ignatzschineria cameli Tsang et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #66755]	Gram stain	negative

[Ref.: #66755]	Cell shape	rod-shaped

[Ref.: #66755]	Motility	no

[Ref.: #66755]	Colony size	1 mm
[Ref.: #66755]	Colony color	grey
[Ref.: #66755]	Colony shape	circular
[Ref.: #66755]	Incubation period	1 day
[Ref.: #66755]	Cultivation medium used	HBA

Information on culture and growth conditions Culture and growth conditions

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Culture medium

BHI agar

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Culture medium growth

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Culture medium

HBA

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Culture medium growth

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Culture medium

Müller-Hinton broth

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Culture medium growth

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Culture medium

SBA

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #66755]			growth	37 °C

	pH	Kind of pH		pH
[Ref.: #66755]			optimum	7.5-8.0
[Ref.: #66755]			growth	7.0-9.0

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

[Ref.: #66755]	Ability of spore formation	no
[Ref.: #125439]	Ability of spore formation	no Confidence in %97.3

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66755]		NaCl		growth	0-2	%
[Ref.: #66755]		NaCl		optimum	0.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66755]	citric acid ChEBI	-	assimilation
[Ref.: #66755]	D-arabinose ChEBI	-	fermentation
[Ref.: #66755]	D-arabinose ChEBI	-	oxidation
[Ref.: #66755]	D-fucose ChEBI	-	fermentation
[Ref.: #66755]	D-fucose ChEBI	-	oxidation
[Ref.: #66755]	D-galactose ChEBI	-	fermentation
[Ref.: #66755]	D-galactose ChEBI	-	oxidation
[Ref.: #66755]	D-glucose ChEBI	-	fermentation
[Ref.: #66755]	D-glucose ChEBI	-	oxidation
[Ref.: #66755]	D-sorbitol ChEBI	-	fermentation
[Ref.: #66755]	D-sorbitol ChEBI	-	oxidation
[Ref.: #66755]	D-xylose ChEBI	-	fermentation
[Ref.: #66755]	D-xylose ChEBI	-	oxidation
[Ref.: #66755]	lactose ChEBI	-	fermentation
[Ref.: #66755]	lactose ChEBI	-	oxidation
[Ref.: #66755]	maltose ChEBI	-	fermentation
[Ref.: #66755]	maltose ChEBI	-	oxidation
[Ref.: #66755]	melibiose ChEBI	-	fermentation
[Ref.: #66755]	melibiose ChEBI	-	oxidation
[Ref.: #66755]	myo-inositol ChEBI	-	fermentation
[Ref.: #66755]	myo-inositol ChEBI	-	oxidation
[Ref.: #66755]	raffinose ChEBI	-	fermentation
[Ref.: #66755]	raffinose ChEBI	-	oxidation
[Ref.: #66755]	sucrose ChEBI	-	fermentation
[Ref.: #66755]	sucrose ChEBI	-	oxidation
[Ref.: #66755]	trehalose ChEBI	-	fermentation
[Ref.: #66755]	trehalose ChEBI	-	oxidation
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #66755]	Amikacin ChEBI	yes	8	µg/mL
[Ref.: #66755]	ampicillin ChEBI	yes	8	µg/mL
[Ref.: #66755]	aztreonam ChEBI	yes	1	µg/mL
[Ref.: #66755]	ceftazidime ChEBI	yes	1	µg/mL
[Ref.: #66755]	ceftriaxone ChEBI	yes	0.5	µg/mL
[Ref.: #66755]	ertapenem ChEBI	yes	0.25	µg/mL
[Ref.: #66755]	gentamicin ChEBI	yes	2	µg/mL
[Ref.: #66755]	imipenem ChEBI	yes	1	µg/mL
[Ref.: #66755]	meropenem ChEBI	yes	0.5	µg/mL
[Ref.: #66755]	nitrofurantoin ChEBI	yes	32	µg/mL
[Ref.: #66755]	tobramycin ChEBI	yes	2	µg/mL
	Only first 10 entries are displayed. Click here to see all.

	Group ID of combined antibiotics	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #66755]	20	ampicillin ChEBI	yes	4	µg/mL
[Ref.: #66755]	18	clavulanic acid ChEBI	yes	2	µg/mL
[Ref.: #66755]	16	piperacillin ChEBI	yes	8	µg/mL
[Ref.: #66755]	20	sulbactam ChEBI	yes	2	µg/mL
[Ref.: #66755]	26	sulfamethoxazole ChEBI				yes	76	µg/mL
[Ref.: #66755]	16	tazobactam ChEBI	yes	4	µg/mL
[Ref.: #66755]	18	ticarcillin ChEBI	yes	8	µg/mL
[Ref.: #66755]	26	trimethoprim ChEBI				yes	4	µg/mL

	Metabolite production	Metabolite	Production
[Ref.: #66755]		hydrogen sulfide ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #66755]	caseinase	-	3.4.21.50
[Ref.: #66755]	catalase	+	1.11.1.6
[Ref.: #66755]	cytochrome oxidase	+	1.9.3.1
[Ref.: #66755]	gelatinase	-
[Ref.: #66755]	urease	-	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66755]	Sample type/isolated from	the foot necrotic tissue of a dromedary with squamous cell carcinoma with secondary inflammation
[Ref.: #66755]	Geographic location (country and/or sea, region)	Dubai
[Ref.: #66755]	Country	United Arab Emirates
[Ref.: #66755]	Country ISO 3 Code	ARE
[Ref.: #66755]	Continent	Asia
[Ref.: #66755]	Enrichment culture	blood agar base no. 2, chocolate agar, MacConkey agar
[Ref.: #66755]	Enrichment culture composition	7% sheep blood or with 7 % horse blood
[Ref.: #66755]	Enrichment culture duration	1 day
[Ref.: #66755]	Enrichment culture temperature	37 ̊C
[Ref.: #66755]	Isolation/enrichment procedure	The Ignatzschineria-like strain was first isolated from the animal specimens following the routine procedures employed in our veterinary diagnostic laboratory. The samples were inoculated onto blood agar base no. 2 with 7 % sheep blood or with 7 % horse blood, chocolate agar and MacConkey agar. Bacterial growth was observed on all the media after 1 day of incubation under aerobic condition at 37°C, and they were subsequently subcultured on brain-heart infusion agar under the same incubation condition.
* marker position based on {}

Isolation sources categories

#Host Body-Site	#Limb	#Foot
#Infection	#Inflammation	-
#Host	#Mammals	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC377575 (>99% sequence identity) for Ignatzschineria from Microbeatlas

Aquatic Samples	164
Soil Samples	131
Animal Samples	564
Plant Samples	31
Total Samples	890

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66755]	Ignatzschineria cameli UAE-HKU57 gene for 16S ribosomal RNA, partial sequence	LC377575	1488	GenBank ENA	2182793 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Ignatzschineria cameli UAE-HKU57	GCA_003121895	contig	GenBank ENA	2182793 tax ID	*
[Ref.: #66792]	Ignatzschineria cameli UAE-HKU57	2831766805	draft	JGI IMG/M	2182793 tax ID	*

[Ref.: #66755]

GC-content

41.71-41.86 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Ignatzschineria cameli UAE-HKU57 NCBI: GCA_003121895
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	no	97.3
[Ref.: #125439]	BacteriaNet	motilityⓘ	no	66.3
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	negative	89.3
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	facultative aerobe	75.2

Availability in culture collections External links

[Ref.: #66755]

Culture collection no.

CCOS 1165, NBRC 113042

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ignatzschineria cameli sp. nov., isolated from necrotic foot tissue of dromedaries (Camelus dromedarius) and associated maggots (Wohlfahrtia species) in Dubai.	Tsang CC, Tang JYM, Fong JYH, Kinne J, Lee HH, Joseph M, Jose S, Schuster RK, Tang Y, Sivakumar S, Chen JHK, Teng JLL, Lau SKP, Wernery U, Woo PCY	Int J Syst Evol Microbiol	10.1099/ijsem.0.003046	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66755

Chi-Ching Tsang, James Y. M. Tang, Jordan Y. H. Fong, Jörg Kinne, Hwei Huih Lee, Marina Joseph, Shanty Jose, Rolf K. Schuster, Ying Tang, Saritha Sivakumar, Jonathan H. K. Chen, Jade L. L. Teng, Susanna K. P. Lau, Ulrich Wernery, Patrick C. Y. Woo: Ignatzschineria cameli sp. nov., isolated from necrotic foot tissue of dromedaries (Camelus dromedarius) and associated maggots (Wohlfahrtia species) in Dubai. IJSEM 68: 3627 - 3634 2018 ( DOI 10.1099/ijsem.0.003046 , PubMed 30303475 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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