Name: Alteromonas alterisediminis IO390401
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159815

Type strain:

Species: Alteromonas alterisediminis

Strain Designation: IO390401

Culture col. no.: JCM 32638, CGMCC 1.13554, CCTCC AB 2018072, CGMCC AB 2018072

Strain history: J. Chen; Zhejiang Wanli Univ., China; IO390401.

NCBI tax ID(s): 2079254 (species)

Section

Alteromonas alterisediminis IO390401 is a mesophilic, Gram-negative, motile bacterium that forms circular colonies and was isolated from surface seawater sample .

colony-forming
Gram-negative
motile
rod-shaped
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Alteromonas*
	Species	**Alteromonas alterisediminis**
	Full Scientific Name (LPSN)	Alteromonas alterisediminis Gago et al. 2021

	Synonym	Alteromonas indica
	Synonym	Salinimonas sediminis

Information on morphological and physiological properties Morphology

[Ref.: #66780]	Gram stain	negative

[Ref.: #66780]	Cell shape	rod-shaped

[Ref.: #66780]	Motility	yes

[Ref.: #66780]	Flagellum arrangement	monopolar

[Ref.: #66780]	Colony size	1-3 mm
[Ref.: #66780]	Colony color	yellow
[Ref.: #66780]	Colony shape	circular
[Ref.: #66780]	Incubation period	3 days
[Ref.: #66780]	Cultivation medium used	Marine agar (MA)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66780]

Culture medium

Marine agar (MA)

[Ref.: #66780]

Culture medium growth

[Ref.: #66780]

Culture medium

tryptic soy agar (TSA)

[Ref.: #66780]

Culture medium growth

[Ref.: #66780]

Culture medium

MAC agar

[Ref.: #66780]

Culture medium growth

		Temperature
[Ref.: #66780]	optimum	28-30 °C
[Ref.: #66780]	growth	4-37 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #66780]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #66780]			optimum	7-8
[Ref.: #66780]			growth	5-10

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66780]		NaCl		growth	1-10	%(w/v)
[Ref.: #66780]		NaCl		optimum	5.5-6.0	%(w/v)

[Ref.: #66780]

Observation

The major polar lipids are phosphatidylglycerol and phosphatidylethanolamine. In addition, trace amounts of phospholipids, glycolipids and aminolipids are detected.

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66780]	adipate ChEBI	+	hydrolysis
[Ref.: #66780]	casein	+	hydrolysis
[Ref.: #66780]	D-glucose ChEBI	+	hydrolysis
[Ref.: #66780]	D-mannitol ChEBI	+	hydrolysis
[Ref.: #66780]	D-mannose ChEBI	+	hydrolysis
[Ref.: #66780]	esculin ChEBI	+	builds acid from
[Ref.: #66780]	gelatin ChEBI	+	degradation
[Ref.: #66780]	gelatin ChEBI	+	hydrolysis
[Ref.: #66780]	glucose ChEBI	+	builds acid from
[Ref.: #66780]	malate ChEBI	+	hydrolysis
[Ref.: #66780]	N-acetylglucosamine ChEBI	+	hydrolysis
[Ref.: #66780]	potassium gluconate ChEBI	+	hydrolysis
[Ref.: #66780]	starch ChEBI	+	hydrolysis
[Ref.: #66780]	tween 20 ChEBI	+	hydrolysis
[Ref.: #66780]	tween 60 ChEBI	+	hydrolysis
[Ref.: #66780]	tween 80 ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #66780]	2-nitrophenyl beta-D-galactopyranoside	+	3.2.1.52
[Ref.: #66780]	acid phosphatase	+	3.1.3.2
[Ref.: #66780]	alkaline phosphatase	+	3.1.3.1
[Ref.: #66780]	alpha-galactosidase	+	3.2.1.22
[Ref.: #66780]	alpha-glucosidase	+	3.2.1.20
[Ref.: #66780]	beta-galactosidase	+	3.2.1.23
[Ref.: #66780]	beta-glucosidase	+	3.2.1.21
[Ref.: #66780]	catalase	+	1.11.1.6
[Ref.: #66780]	cystine arylamidase	+	3.4.11.3
[Ref.: #66780]	cytochrome oxidase	+	1.9.3.1
[Ref.: #66780]	esterase (C 4)	+
[Ref.: #66780]	esterase Lipase (C 8)	+
[Ref.: #66780]	leucine arylamidase	+	3.4.11.1
[Ref.: #66780]	lipase	+
[Ref.: #66780]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #66780]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66780]	Sample type/isolated from	surface seawater sample (25m water depth)
[Ref.: #66780]	Geographic location (country and/or sea, region)	sulphide region of the Indian Ocean
[Ref.: #66780]	Geographic location	-34.8000°/54.6000°
[Ref.: #66780]	Enrichment culture	Marine agar
[Ref.: #66780]	Enrichment culture temperature	25 ̊C
[Ref.: #66780]	Isolation/enrichment procedure	Strain IO390401 was isolated by using the standard dilution plating technique at 25 C on marine agar 2216 (MA; BD Difco) and cultivated routinely at 30 C on MA.

[Ref.: #67770]	Sample type/isolated from	Surface seawater from the Indian Ocean
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Surface water

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66780]	Alteromonas indica strain IO390401 16S ribosomal RNA gene, partial sequence	MG852173	1457	ENA	2079254 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Alteromonas indica IO390401	GCA_003056425	scaffold	GenBank	2079254 tax ID

[Ref.: #66780]

GC-content

48.2 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Alteromonas indica IO390401 NCBI: GCA_003056425.1
[Ref.: #69480]	flagellated	yes	90.461	yes
[Ref.: #69480]	gram-positive	no	98.983	yes
[Ref.: #69480]	anaerobic	no	98.421	no
[Ref.: #69480]	halophile	yes	80.289	yes
[Ref.: #69480]	spore-forming	no	96.733	no
[Ref.: #69480]	glucose-util	yes	92.714	no
[Ref.: #69480]	aerobic	yes	90.523	no
[Ref.: #69480]	thermophile	no	99.297	yes
[Ref.: #69480]	motile	yes	91.143	yes
[Ref.: #69480]	glucose-ferment	no	83.762	no

Availability in culture collections External links

[Ref.: #66780]

Culture collection no.

JCM 32638, CGMCC 1.13554, CCTCC AB 2018072, CGMCC AB 2018072

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66780

Danqiu Lin, Yong Chen, Sidong Zhu, Jifang Yang and Jigang Chen: Alteromonas indica sp. nov., isolated from surface seawater from the Indian Ocean. IJSEM 68: 3881 - 3885 2018 ( DOI 10.1099/ijsem.0.003078 , PubMed 30351269 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Alteromonas indica in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Alteromonas indica IO390401

Change proposal

Change proposal