Name: Sorangium reichenbachii ERS2489003
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159802

Type strain:

Species: Sorangium reichenbachii

Strain Designation: ERS2489003

Culture col. no.: DSM 105769, NCCB 100644, Soce 1828

NCBI tax ID(s): 2093419 (species)

Section

Sorangium reichenbachii ERS2489003 is a spore-forming, mesophilic, Gram-negative bacterium that builds sporangioles and was isolated from Soil sample.

Gram-negative
rod-shaped
spore-forming
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Myxococcales*
	Family	*Polyangiaceae*
	Genus	*Sorangium*
	Species	**Sorangium reichenbachii**
	Full Scientific Name (LPSN)	Sorangium reichenbachii Mohr et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #66744]	Gram stain	negative

[Ref.: #66744]	Cell length	3.7-7.7 µm

[Ref.: #66744]	Cell width	0.8-1.3 µm

[Ref.: #66744]	Cell shape	rod-shaped

[Ref.: #66744]	Motility	no

[Ref.: #66744]	Colony color	bright orange
[Ref.: #66744]	Cultivation medium used	P-agar

[Ref.: #66744]	Colony color	bright orange
[Ref.: #66744]	Cultivation medium used	CY-AGAR

[Ref.: #66744]	Colony color	bright orange
[Ref.: #66744]	Cultivation medium used	Liquid media

[Ref.: #66744]	Colony color	light orange to transparent
[Ref.: #66744]	Cultivation medium used	VY/2 AGAR

[Ref.: #66744]	Multicellular complex forming ability	yes
[Ref.: #66744]	Multicellular complex name	sporangioles
[Ref.: #66744]	Multicellular complex color	orange
[Ref.: #66744]	Multicellular complex further description	Orange-colored scattered sporangioles can be observed on water agar with E. coli-bait.

Information on culture and growth conditions Culture and growth conditions

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Culture medium

CY-AGAR

[Ref.: #66744]

Culture medium growth

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Culture medium

Liquid media

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Culture medium growth

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Culture medium

P-agar

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Culture medium growth

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Culture medium

VY/2 AGAR

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #66744]			optimum	34 °C
[Ref.: #66744]			growth	18-37 °C

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Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #66744]			optimum	7
[Ref.: #66744]			growth	6-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #66744]	Spore description	Myxospores are 0.8 µm wide and 1.1 µm long
[Ref.: #66744]	Type of spore	myxospore
[Ref.: #66744]	Ability of spore formation	yes

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #66744]	ampicillin ChEBI		yes
[Ref.: #66744]	cephalexin ChEBI	yes
[Ref.: #66744]	hygromycin ChEBI	yes
[Ref.: #66744]	kanamycin ChEBI		yes
[Ref.: #66744]	spectinomycin ChEBI	yes
[Ref.: #66744]	trimethoprim ChEBI		yes

	Enzyme	Enzyme activity	EC number
[Ref.: #66744]	acid phosphatase	+	3.1.3.2
[Ref.: #66744]	alkaline phosphatase	+	3.1.3.1
[Ref.: #66744]	alpha-fucosidase	-	3.2.1.51
[Ref.: #66744]	alpha-galactosidase	-	3.2.1.22
[Ref.: #66744]	alpha-glucosidase	+	3.2.1.20
[Ref.: #66744]	alpha-mannosidase	-	3.2.1.24
[Ref.: #66744]	beta-galactosidase	+	3.2.1.23
[Ref.: #66744]	beta-glucosidase	+	3.2.1.21
[Ref.: #66744]	beta-glucuronidase	-	3.2.1.31
[Ref.: #66744]	catalase	+	1.11.1.6
[Ref.: #66744]	chymotrypsin	+	3.4.4.5
[Ref.: #66744]	cystine arylamidase	+	3.4.11.3
[Ref.: #66744]	cytochrome oxidase	-	1.9.3.1
[Ref.: #66744]	esterase (C 4)	+
[Ref.: #66744]	esterase Lipase (C 8)	+
[Ref.: #66744]	leucine arylamidase	+	3.4.11.1
[Ref.: #66744]	lipase (C 14)	+
[Ref.: #66744]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #66744]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #66744]	trypsin	+	3.4.21.4
[Ref.: #66744]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66744]	Sample type/isolated from	Soil sample
[Ref.: #66744]	Country	Egypt
[Ref.: #66744]	Country ISO 3 Code	EGY
[Ref.: #66744]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MG824984 (>99% sequence identity) for Sorangium cellulosum subclade from Microbeatlas

Aquatic Samples	263
Soil Samples	7143
Animal Samples	472
Plant Samples	2976
Total Samples	10854

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66744]	Sorangium sp. Soce 1828 16S ribosomal RNA gene, complete sequence	MG824984	1451	ENA	2093419 tax ID

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GC-content

72.6 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #66744]

Culture collection no.

DSM 105769, NCCB 100644, Soce 1828

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	A polyphasic approach leads to seven new species of the cellulose-decomposing genus Sorangium, Sorangium ambruticinum sp. nov., Sorangium arenae sp. nov., Sorangium bulgaricum sp. nov., Sorangium dawidii sp. nov., Sorangium kenyense sp. nov., Sorangium orientale sp. nov. and Sorangium reichenbachii sp. nov.	Mohr KI, Wolf C, Nubel U, Szafranska AK, Steglich M, Hennessen F, Gemperlein K, Kampfer P, Martin K, Muller R, Wink J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003034	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66744

Kathrin I. Mohr, Corinna Wolf, Ulrich Nübel, Anna K. Szafranska, Matthias Steglich, Fabienne Hennessen, Katja Gemperlein, Peter Kaempfer, Karin Martin, Rolf Möller and Joachim Wink: A polyphasic approach leads to seven new species of the cellulose-decomposing genus Sorangium, Sorangium ambruticinum sp. nov., Sorangium arenae sp. nov., Sorangium bulgaricum sp. nov., Sorangium dawidii sp. nov., Sorangium kenyense sp. nov., Sorangium orientale sp. nov. and Sorangium reichenbachii sp. nov.. IJSEM 68: 3576 - 3586 2018 ( DOI 10.1099/ijsem.0.003034 , PubMed 30234476 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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