Alcanivorax indicus (CGMCC 1.16233, KCTC 62652, SW127)

Name: Alcanivorax indicus (CGMCC 1.16233, KCTC 62652, SW127)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159770

Type strain

Strain Designation SW127

Culture col. no. CGMCC 1.16233 KCTC 62652 SW127

NCBI tax ID(s) 2202653

Special Collections KCTC Literature strains

History <- Lei Song, Institute of Microbiology, Chinese Academy of Sciences

Links

Alcanivorax indicus SW127 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from seawater sample .

Gram-negative motile rod-shaped colony-forming aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 27912

KCTC 62652

@ref 20215

Last LPSN update 2026-02-09 11:38:44

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Alcanivoracaceae

Genus Alcanivorax

Species Alcanivorax indicus

Full scientific name Alcanivorax indicus Song et al. 2018

Synonyms (1)

Isoalcanivorax indicus

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Flagellum arrangement	Confidence
66766	negative	rod-shaped	peritrichous
125438	negative			95.75
125439	negative			97.6

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
66766	white	circular	3 days	216L agar

Culture and growth conditions

Culture medium

@ref	Name	Growth
66766	216L agar

Culture temp

@ref	Growth	Type	Temperature (°C)
66766	positive	optimum	30
66766	positive	growth	8-42
67771	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
66766	positive	optimum	7.5
66766	positive	growth	5.5-9	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
66766	aerobe
67771	aerobe

Spore formation

@ref	Spore formation	Confidence
66766
125438		94.368
125439		98.6

Halophily

@ref	Salt	Growth	Tested relation	Concentration
66766	NaCl	positive	growth	0.5-11 %(w/v)
66766	NaCl	positive	optimum	3-4 %(w/v)

Observation

@ref	Observation
66766	H2S is not produced from thiosulphate.
66766	Grows in ASM medium with n-alkane as carbon source with chain lengths from C10 to C32.

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
66766	30796 ChEBI	(R)-malic acid	-	carbon source
66766	16651 ChEBI	(S)-lactate	-	carbon source
66766	30797 ChEBI	(S)-malic acid	-	carbon source
66766	64552 ChEBI	2-hydroxybutyrate	-	carbon source
66766	16763 ChEBI	2-oxobutanoate	+	carbon source
66766	16810 ChEBI	2-oxoglutarate	-	carbon source
66766	37054 ChEBI	3-hydroxybutyrate	-	carbon source
66766	73918 ChEBI	3-O-methyl-D-glucose	-	carbon source
66766	18101 ChEBI	4-hydroxyphenylacetic acid	-	carbon source
66766	16411 ChEBI	acetic acid	-	carbon source
66766	13705 ChEBI	acetoacetate	+	carbon source
66766	17925 ChEBI	alpha-D-glucose	-	carbon source
66766	73706 ChEBI	bromosuccinate	-	carbon source
66766		casein	+	hydrolysis
66766	17057 ChEBI	cellobiose	-	carbon source
66766	53258 ChEBI	citric acid	-	carbon source
66766	18333 ChEBI	D-arabitol	-	carbon source
66766	29990 ChEBI	D-aspartate	-	carbon source
66766	15824 ChEBI	D-fructose	-	carbon source
66766	78697 ChEBI	D-fructose 6-phosphate	-	carbon source
66766	28847 ChEBI	D-fucose	-	carbon source
66766	12936 ChEBI	D-galactose	-	carbon source
66766	18024 ChEBI	D-galacturonic acid	-	carbon source
66766	30612 ChEBI	D-glucarate	-	carbon source
66766	8391 ChEBI	D-gluconate	-	carbon source
66766	14314 ChEBI	D-glucose 6-phosphate	-	carbon source
66766	15748 ChEBI	D-glucuronate	-	carbon source
66766	16899 ChEBI	D-mannitol	-	carbon source
66766	16024 ChEBI	D-mannose	-	carbon source
66766	16523 ChEBI	D-serine	-	carbon source
66766	17924 ChEBI	D-sorbitol	-	carbon source
66766	16551 ChEBI	D-trehalose	-	carbon source
66766	23652 ChEBI	dextrin	+	carbon source
66766	4853 ChEBI	esculin	+	hydrolysis
66766	15740 ChEBI	formate	-	carbon source
66766	16537 ChEBI	galactarate	-	carbon source
66766	16865 ChEBI	gamma-aminobutyric acid	-	carbon source
66766	5291 ChEBI	gelatin	-	carbon source
66766	5291 ChEBI	gelatin	+	hydrolysis
66766	28066 ChEBI	gentiobiose	-	carbon source
66766	32323 ChEBI	glucuronamide	+	carbon source
66766	17754 ChEBI	glycerol	-	carbon source
66766	70744 ChEBI	glycine-proline	-	carbon source
66766	17596 ChEBI	inosine	-	carbon source
66766	16977 ChEBI	L-alanine	-	carbon source
66766	16467 ChEBI	L-arginine	-	carbon source
66766	29991 ChEBI	L-aspartate	-	carbon source
66766	18287 ChEBI	L-fucose	-	carbon source
66766	17464 ChEBI	L-galactonic acid gamma-lactone	-	carbon source
66766	29985 ChEBI	L-glutamate	-	carbon source
66766	15971 ChEBI	L-histidine	-	carbon source
66766	18183 ChEBI	L-pyroglutamic acid	-	carbon source
66766	62345 ChEBI	L-rhamnose	-	carbon source
66766	17115 ChEBI	L-serine	-	carbon source
66766	17716 ChEBI	lactose	-	carbon source
66766	17306 ChEBI	maltose	-	carbon source
66766	28053 ChEBI	melibiose	-	carbon source
66766	74611 ChEBI	methyl (R)-lactate	-	carbon source
66766	320055 ChEBI	methyl beta-D-glucopyranoside	-	carbon source
66766	51850 ChEBI	methyl pyruvate	-	carbon source
66766	17268 ChEBI	myo-inositol	-	carbon source
66766	63153 ChEBI	N-acetyl-D-mannosamine	-	carbon source
66766	28800 ChEBI	N-acetylgalactosamine	-	carbon source
66766	59640 ChEBI	N-acetylglucosamine	-	carbon source
66766	35418 ChEBI	n-acetylneuraminate	-	carbon source
66766	17632 ChEBI	nitrate	+	reduction
66766	17309 ChEBI	pectin	-	carbon source
66766	17272 ChEBI	propionate	-	carbon source
66766	26490 ChEBI	quinate	-	carbon source
66766	16634 ChEBI	raffinose	-	carbon source
66766	17814 ChEBI	salicin	-	carbon source
66766	17164 ChEBI	stachyose	-	carbon source
66766	28017 ChEBI	starch	-	hydrolysis
66766	17992 ChEBI	sucrose	-	carbon source
66766	27897 ChEBI	tryptophan	-	energy source
66766	32528 ChEBI	turanose	-	carbon source
66766	53423 ChEBI	tween 40	+	carbon source
66766	53426 ChEBI	tween 80	+	hydrolysis

Metabolite production

@ref	Chebi-ID	Metabolite
66766	15688 ChEBI	acetoin
66766	16136 ChEBI	hydrogen sulfide
66766	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
66766	15688 ChEBI	acetoin	+
66766	35581 ChEBI	indole		-

Enzymes

@ref	Value	Activity	Ec
66766	acid phosphatase	+	3.1.3.2
66766	alkaline phosphatase	+	3.1.3.1
66766	alpha-chymotrypsin	-	3.4.21.1
66766	alpha-fucosidase	-	3.2.1.51
66766	alpha-galactosidase	-	3.2.1.22
66766	alpha-glucosidase	-	3.2.1.20
66766	alpha-mannosidase	-	3.2.1.24
66766	arginine dihydrolase	+	3.5.3.6
66766	beta-galactosidase	+	3.2.1.23
66766	beta-glucosidase	-	3.2.1.21
66766	beta-glucuronidase	-	3.2.1.31
66766	catalase	+	1.11.1.6
66766	cystine arylamidase	+	3.4.11.3
66766	cytochrome oxidase	+	1.9.3.1
66766	esterase (C 4)	+
66766	esterase Lipase (C 8)	+
66766	leucine arylamidase	+	3.4.11.1
66766	lipase (C 14)	+
66766	lysine decarboxylase	-	4.1.1.18
66766	N-acetyl-beta-glucosaminidase	-	3.2.1.52
66766	naphthol-AS-BI-phosphohydrolase	+
66766	ornithine decarboxylase	-	4.1.1.17
66766	trypsin	-	3.4.21.4
66766	tryptophan deaminase	-	4.1.99.1
66766	urease	-	3.5.1.5
66766	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

@ref

66766

Fatty acid	Percentage
C18:1 w7c and/or C18:1 w6c	44.9
C16:0	25.2
C12:0	9
C12:0 3OH	8.1
C16:1 w7c and/or C16:1 w6c	4
C18:1 w9c	2.5
C17:1 iso w9c / C16:0 10-methyl	2.3
C14:0	2

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Country	Latitude	Longitude	Enrichment culture	Isolation procedure	Geographic location	Country ISO 3 Code	Continent
66766	seawater sample (depth 1500m)	Indian Ocean	3.708	63.8311 3.708/63.8311	marine agar 2216	serial dilution and plating method
67771	From seawater	China					Northwest Indian Ocean	CHN	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM325918v1 assembly for Isoalcanivorax indicus SW127	contig	GCA_003259185	2202653.3	2883121650	2202653	74.6

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66766	Isoalcanivorax indicus strain SW127 16S ribosomal RNA gene, partial sequence	MH279472	1495		2202653

GC content

@ref	GC-content (mol%)	Method
66766	62.8	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Isoalcanivorax indicus SW127
NCBI: GCA_003259185

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	98.60	no
125439	motility	BacteriaNetⓘ	yes	87.80	no
125439	gram_stain	BacteriaNetⓘ	negative	97.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	78.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Alcanivorax sp. SW127
PATRIC: 2202653.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.75	yes
125438	anaerobic	anaerobicⓘ	no	94.24	yes
125438	spore-forming	spore-formingⓘ	no	94.37	yes
125438	aerobic	aerobicⓘ	yes	80.00	yes
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	yes	53.10	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Alcanivorax limicola sp. nov., isolated from a soda alkali-saline soil.	Zhu L, Wang Y, Ding Y, Luo K, Yang B, Yang S, Liu S, Cui H, Wei W	Arch Microbiol	10.1007/s00203-021-02638-3	2021
Phylogeny	Alcanivorax indicus sp. nov., isolated from seawater.	Song L, Liu H, Cai S, Huang Y, Dai X, Zhou Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.003058	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66766	Lei Song, Hongcan Liu, Shichun Cai, Ying Huang, Xin Dai, Yuguang Zhou: Alcanivorax indicus sp. nov., isolated from seawater. IJSEM 68: 3785 - 3789 2018 ( DOI 10.1099/ijsem.0.003058 , PubMed 30307386 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Alcanivorax indicus (CGMCC 1.16233, KCTC 62652, SW127)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003259185

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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