Thalassorhabdus alkalitolerans (MCC 3411, CGMCC 1.15772, KCTC 33941)

Name: Thalassorhabdus alkalitolerans (MCC 3411, CGMCC 1.15772, KCTC 33941)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159743

Type strain

Strain Designation G27

Culture col. no. MCC 3411 CGMCC 1.15772 KCTC 33941 G27 KCTC 43224

NCBI tax ID(s) 2282697

Special Collections KCTC Literature strains

History <- S. Vishnuvardhan Reddy, Mahatma Gandhi Univ.

Links

Thalassorhabdus alkalitolerans G27 is an aerobe, Gram-variable, rod-shaped bacterium that was isolated from marine sediment.

Gram-variable rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 26511

KCTC 33941

@ref 20215

Last LPSN update 2026-02-09 11:38:43

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Thalassorhabdus

Species Thalassorhabdus alkalitolerans

Full scientific name Thalassorhabdus alkalitolerans Sultanpuram and Mothe 2018

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
66660	variable	0.8-1.2 µm	0.5-0.9 µm	rod-shaped
67771				rod-shaped
67771	variable

Culture and growth conditions

Culture medium

@ref	Name	Growth
66660	alkaline nutrient agar

Culture temp

@ref	Growth	Type	Temperature (°C)
66660	positive	growth	20-65
66660	positive	optimum	37-40
67771	positive	growth	37

Culture pH

@ref	Ability	Type	PH	PH range
66660	positive	optimum	8.5-9.5
66660	positive	growth	7.5-11	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
66660	aerobe
67771	aerobe

Spore formation

@ref	Type of spore	Spore formation
66660	endospore
67771

Halophily

@ref	Salt	Growth	Tested relation	Concentration
66660	NaCl	positive	growth	0-11 %
66660	NaCl	positive	optimum	0.5-2 %(w/v)

Observation

@ref	Observation
66660	Gram-stain-variable (earlier in growth stains as Gram-negative but with growth stains Gram-positive)
67771	quinones: MK-7, MK-6(minor)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
66660	31206 ChEBI	ammonium chloride	+	nitrogen source
66660	22605 ChEBI	arabinitol	-	carbon source
66660	35391 ChEBI	aspartate	-	nitrogen source
66660		casein	-	hydrolysis
66660	17057 ChEBI	cellobiose	-	builds acid from
66660	17057 ChEBI	cellobiose	-	builds gas from
66660	17057 ChEBI	cellobiose	+	carbon source
66660	17057 ChEBI	cellobiose	+	energy source
66660	62968 ChEBI	cellulose	+	hydrolysis
66660	53258 ChEBI	citric acid	+	assimilation
66660	17108 ChEBI	D-arabinose	-	carbon source
66660	15824 ChEBI	D-fructose	-	builds acid from
66660	15824 ChEBI	D-fructose	-	builds gas from
66660	15824 ChEBI	D-fructose	+	carbon source
66660	15824 ChEBI	D-fructose	+	energy source
66660	12936 ChEBI	D-galactose	-	builds acid from
66660	12936 ChEBI	D-galactose	-	builds gas from
66660	12936 ChEBI	D-galactose	+	carbon source
66660	12936 ChEBI	D-galactose	+	energy source
66660	17634 ChEBI	D-glucose	-	builds acid from
66660	17634 ChEBI	D-glucose	-	builds gas from
66660	17634 ChEBI	D-glucose	+	carbon source
66660	17634 ChEBI	D-glucose	+	energy source
66660	16899 ChEBI	D-mannitol	-	carbon source
66660	17924 ChEBI	D-sorbitol	-	carbon source
66660	65327 ChEBI	D-xylose	-	builds acid from
66660	65327 ChEBI	D-xylose	-	builds gas from
66660	65327 ChEBI	D-xylose	+	carbon source
66660	65327 ChEBI	D-xylose	+	energy source
66660	16991 ChEBI	dna	-	hydrolysis
66660	17113 ChEBI	erythritol	-	carbon source
66660	4853 ChEBI	esculin	+	hydrolysis
66660	16813 ChEBI	galactitol	-	carbon source
66660	5291 ChEBI	gelatin	-	hydrolysis
66660	17234 ChEBI	glucose	-	fermentation
66660	29987 ChEBI	glutamate	-	nitrogen source
66660	17754 ChEBI	glycerol	-	carbon source
66660	606565 ChEBI	hippurate	-	hydrolysis
66660	17368 ChEBI	hypoxanthine	-	hydrolysis
66660	15443 ChEBI	inulin	-	carbon source
66660	17716 ChEBI	lactose	-	builds acid from
66660	17716 ChEBI	lactose	-	builds gas from
66660	17716 ChEBI	lactose	+	carbon source
66660	17716 ChEBI	lactose	+	energy source
66660	15792 ChEBI	malonate	-	builds acid from
66660	15792 ChEBI	malonate	-	builds gas from
66660	15792 ChEBI	malonate	+	carbon source
66660	15792 ChEBI	malonate	+	energy source
66660	37684 ChEBI	mannose	-	carbon source
66660	6731 ChEBI	melezitose	-	carbon source
66660	28053 ChEBI	melibiose	-	carbon source
66660	17268 ChEBI	myo-inositol	-	carbon source
66660	17632 ChEBI	nitrate	+	nitrogen source
66660	17632 ChEBI	nitrate	+	reduction
66660	16301 ChEBI	nitrite	+	nitrogen source
66660	16634 ChEBI	raffinose	-	carbon source
66660	26546 ChEBI	rhamnose	-	builds acid from
66660	26546 ChEBI	rhamnose	-	builds gas from
66660	26546 ChEBI	rhamnose	+	carbon source
66660	26546 ChEBI	rhamnose	+	energy source
66660	15963 ChEBI	ribitol	-	carbon source
66660	17814 ChEBI	salicin	-	carbon source
66660	84997 ChEBI	sodium gluconate	-	carbon source
66660	27922 ChEBI	sorbose	-	carbon source
66660	28017 ChEBI	starch	-	hydrolysis
66660	17992 ChEBI	sucrose	-	builds acid from
66660	17992 ChEBI	sucrose	-	builds gas from
66660	17992 ChEBI	sucrose	+	carbon source
66660	17992 ChEBI	sucrose	+	energy source
66660	27082 ChEBI	trehalose	-	builds acid from
66660	27082 ChEBI	trehalose	-	builds gas from
66660	27082 ChEBI	trehalose	+	carbon source
66660	27082 ChEBI	trehalose	+	energy source
66660	27897 ChEBI	tryptophan	-	energy source
66660	53424 ChEBI	tween 20	-	hydrolysis
66660	18186 ChEBI	tyrosine	+	hydrolysis
66660	16199 ChEBI	urea	-	nitrogen source
66660	15318 ChEBI	xanthine	-	hydrolysis
66660	17151 ChEBI	xylitol	-	carbon source

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.	Sensitivity conc.
66660	2637	Amikacin	30 µg (disc)
66660	28971	ampicillin	10 µg (disc)
66660	100241	ciprofloxacin	5 µg (disc)
66660	48923	erythromycin		15 µg (disc)
66660	17833	gentamicin		120 µg (disc)
66660	6104	kanamycin	30 µg (disc)
66660	100147	nalidixic acid	30 µg (disc)
66660	17334	penicillin		10 µg (disc)
66660	17076	streptomycin		10 µg (disc)
66660	27902	tetracycline		30 µg (disc)
66660	28001	vancomycin		30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite
66660	15688 ChEBI	acetoin
66660	16136 ChEBI	hydrogen sulfide
66660	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
66660	15688 ChEBI	acetoin	-
66660	17234 ChEBI	glucose		-
66660	35581 ChEBI	indole			-

Enzymes

@ref	Value	Activity	Ec
66660	alpha-glucosidase	-	3.2.1.20
66660	beta-galactosidase	+	3.2.1.23
66660	catalase	-	1.11.1.6
66660	cytochrome oxidase	-	1.9.3.1
66660	lipase	-
66660	tryptophan deaminase	-	4.1.99.1
66660	urease	-	3.5.1.5

Fatty acid profile

Metadata FA analysis

@ref

66660

Fatty acid	Percentage
C15:0 anteiso	32.7
C15:0 iso	15.6
C17:0 anteiso	11.6
C16:0	10.6
C16:0 iso	5.7
C18:0	3.9
C20:0	3.5
C17:0 iso	3.3
C16:1 w6c and/or C16:1 w7c	2.4
C14:0 iso	2.4
C19:0	2.1
C17:0	1.5
C14:0	1.3
C18:1 w9c	0.9
C17:1 w5c	0.8
C10:0	0.7
C12:0	0.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture composition	Isolation procedure
66660	marine sediment	Dhuvaran, Gujarat	India	IND	Asia	22.3942	73.2747 22.3942/73.2747	growth medium	containing (g l-1): NaCl (200), KH2PO4 (1), MgSO4.7H2O (0.2), casein enzyme hydrolysate type-I (5), sucrose (5), SL7 trace elements solution (1 ml) [(mg l-1): HCl (25 %, v/v) (1 ml); ZnCl2 (70); MnCl2.4H2O (100); H3BO3 (60); CoCl2.6H2O (200); NiCl2.6H2O (20); Na2MoO4.2H2O (40); CuCl2.2H2O (20)] and agar (30) in 1 litre NaHCO3/Na2CO3 buffer (100 mM in deionized water; pH 9.5)	One gram of air-dried sediment [pH 8.51; conductivity (mS cm-1) 4.0; salinity (%) 8.87; total dissolved solids (g ml-1) 7.63; sodium (%, as Na+) 0.61; potassium (%, as K+) 0.55; phosphate (%, as P2O5) 0.19; nitrogen (%) 0.1; calcium (%, as Ca+) 0.41; magnesium (%, as Mg+) 0.28] was serially diluted up to 10-6 and 100 µl was spread on a growth medium. A pure culture was obtained by repeated streaking of the isolate on alkaline nutrient agar plates (nutrient agar medium emended with 5 %, w/v, NaCl and prepared in the above mentioned buffer).
67771	From marine sediment	Dhuvaran, Gujarat	India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence MF781072 (>99% sequence identity) for Bacillaceae from Microbeatlas

Aquatic Samples	63
Soil Samples	96
Animal Samples	96
Plant Samples	32
Total Samples	287

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4265652v1 assembly for Thalassorhabdus alkalitolerans CGMCC 1.15772	scaffold	GCA_042656525	2282697	74.47
124043	ASM4265658v1 assembly for Thalassorhabdus alkalitolerans CGMCC 1.15772	scaffold	GCA_042656585	2282697	71.87

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66660	Thalassorhabdus alkalitolerans strain G27T 16S ribosomal RNA gene, partial sequence	MF781072	1514		2282697

GC content

@ref	GC-content (mol%)	Method
66660	42.8-44	high performance liquid chromatography (HPLC)
67771	42.8-44.0

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thalassorhabdus alkalitolerans gen. nov., sp. nov., a novel Bacillaceae member isolated from marine sediment.	Sultanpuram VR, Mothe T	Int J Syst Evol Microbiol	10.1099/ijsem.0.002931	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66660	Vishnuvardhan Reddy Sultanpuram, Thirumala Mothe: Thalassorhabdus alkalitolerans gen. nov., sp. nov., a novel Bacillaceae member isolated from marine sediment. IJSEM 68: 2969 - 2976 2018 ( DOI 10.1099/ijsem.0.002931 , PubMed 30028282 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thalassorhabdus alkalitolerans (MCC 3411, CGMCC 1.15772, KCTC 33941)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_042656525

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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