Name: Solitalea longa HR-AV
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159729

Type strain:

Species: Solitalea longa

Strain Designation: HR-AV

Culture col. no.: KACC 19411, JCM 32259

Strain history: C. O. Jeon; Chung-Ang Univ., South Korea; HR-AV.

NCBI tax ID(s): 2079460 (species)

Section

Solitalea longa HR-AV is an aerobe, psychrophilic, Gram-negative bacterium that forms circular colonies and was isolated from river water sample.

colony-forming
Gram-negative
motile
rod-shaped
aerobe
psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Solitalea*
	Species	**Solitalea longa**
	Full Scientific Name (LPSN)	Solitalea longa Lee and Jeon 2018

Information on morphological and physiological properties Morphology

[Ref.: #66637]	Gram stain	negative
[Ref.: #66637]	Cell length	2.2-12 µm
[Ref.: #66637]	Cell width	0.4-0.5 µm
[Ref.: #66637]	Cell shape	rod-shaped
[Ref.: #66637]	Motility	yes

[Ref.: #66637]	Colony color	yellow
[Ref.: #66637]	Colony shape	circular
[Ref.: #66637]	Cultivation medium used	R2A medium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66637]

Culture medium

Reasoner's 2A agar (R2A)

[Ref.: #66637]

Culture medium growth

		Temperature
[Ref.: #66637]	optimum	20 °C
[Ref.: #66637]	growth	5-30 °C
[Ref.: #67770]	growth	20 °C

[Ref.: #66637]	Temperature range	psychrophilic
[Ref.: #67770]	Temperature range	psychrophilic

	pH	Kind of pH		pH
[Ref.: #66637]			growth	7-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #66637]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66637]		NaCl		growth	0-0.5	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66637]	adipate ChEBI	-	assimilation
[Ref.: #66637]	casein	-	hydrolysis
[Ref.: #66637]	D-glucose ChEBI	+	assimilation
[Ref.: #66637]	D-mannitol ChEBI	-	assimilation
[Ref.: #66637]	D-mannose ChEBI	+	assimilation
[Ref.: #66637]	decanoate ChEBI	-	assimilation
[Ref.: #66637]	esculin ChEBI	+	hydrolysis
[Ref.: #66637]	glucose ChEBI	-	fermentation
[Ref.: #66637]	L-arabinose ChEBI	-	assimilation
[Ref.: #66637]	malate ChEBI	+	assimilation
[Ref.: #66637]	maltose ChEBI	+	assimilation
[Ref.: #66637]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #66637]	nitrate ChEBI	-	reduction
[Ref.: #66637]	phenylacetate ChEBI	-	assimilation
[Ref.: #66637]	potassium gluconate ChEBI	-	assimilation
[Ref.: #66637]	sodium citrate ChEBI	-	assimilation
[Ref.: #66637]	starch ChEBI	-	hydrolysis
[Ref.: #66637]	tween 20 ChEBI	-	hydrolysis
[Ref.: #66637]	tween 80 ChEBI	-	hydrolysis
[Ref.: #66637]	tyrosine ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #66637]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #66637]	acid phosphatase	+	3.1.3.2
[Ref.: #66637]	alkaline phosphatase	+	3.1.3.1
[Ref.: #66637]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #66637]	alpha-fucosidase	+	3.2.1.51
[Ref.: #66637]	alpha-galactosidase	+	3.2.1.22
[Ref.: #66637]	alpha-glucosidase	+	3.2.1.20
[Ref.: #66637]	alpha-mannosidase	+	3.2.1.24
[Ref.: #66637]	arginine dihydrolase	-	3.5.3.6
[Ref.: #66637]	beta-galactopyranosidase	+
[Ref.: #66637]	beta-galactosidase	+	3.2.1.23
[Ref.: #66637]	beta-glucosidase	+	3.2.1.21
[Ref.: #66637]	beta-glucuronidase	-	3.2.1.31
[Ref.: #66637]	catalase	-	1.11.1.6
[Ref.: #66637]	cystine arylamidase	+	3.4.11.3
[Ref.: #66637]	cytochrome oxidase	+	1.9.3.1
[Ref.: #66637]	esterase (C 4)	+
[Ref.: #66637]	esterase Lipase (C 8)	+
[Ref.: #66637]	leucine arylamidase	+	3.4.11.1
[Ref.: #66637]	lipase (C 14)	+
[Ref.: #66637]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #66637]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #66637]	trypsin	+	3.4.21.4
[Ref.: #66637]	urease	-	3.5.1.5
[Ref.: #66637]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #66637]

Fatty acid	Percentage
C15:0 iso	28.9
C16:1 w7c and/or C16:1 w6c	12.7
C15:0 anteiso	10.3
C16:1 w5c	8.5
C17:0 iso 3OH	8.1
C15:0 iso 3OH	4
C16:0 3OH	2.6
C16:0 iso	2.2
C14:0 iso	2.1
C19:0	1.3
C15:0 2OH	1.2
C15:0	1.2
C17:1 iso / C17:1 anteiso B	1.2
C16:0 iso 3OH	1.2
10-methyl C16:0 and/or C17:1 w9c	1.1
C16:0	1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66637]	Sample type/isolated from	river water sample
[Ref.: #66637]	Sampling date	2017-07-18
[Ref.: #66637]	Geographic location (country and/or sea, region)	HeukSeok area, Han River
[Ref.: #66637]	Country	Republic of Korea
[Ref.: #66637]	Country ISO 3 Code	KOR
[Ref.: #66637]	Continent	Asia
[Ref.: #66637]	Geographic location	37.5093°/126.9650°
[Ref.: #66637]	Enrichment culture	R2A agar
[Ref.: #66637]	Enrichment culture duration	5 days
[Ref.: #66637]	Enrichment culture temperature	25 ̊C
[Ref.: #66637]	Isolation/enrichment procedure	For the isolation of bacteria, a river water sample collected on July 18, 2017 was serially diluted in phosphate-buffered saline (PBS; 137 mM NaCl, 2.7 mM KCl, 10 mM Na2HPO4, 2 mM KH2PO4, pH 7.2) and 100 µl of each dilution was spread on Reasoner's 2A agar (BD) and incubated aerobically at 25°C for 5 days.

[Ref.: #67770]	Sample type/isolated from	Freshwater sample from the Heukseok area of the Han River
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#River (Creek)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66637]	Solitalea sp. strain HR-AV 16S ribosomal RNA gene, complete sequence	MF685247	1523	ENA	2079460 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Solitalea longa HR-AV	GCA_002920915	contig	GenBank	2079460 tax ID	*
[Ref.: #66792]	Solitalea longa HR-AV	2832312960	draft	JGI IMG/M	2079460 tax ID	*

[Ref.: #67770]

GC-content

38.4 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #66637]

Culture collection no.

KACC 19411, JCM 32259

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Solitalea longa sp. nov., isolated from freshwater and emended description of the genus Solitalea.	Lee Y, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijsem.0.002903	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66637

Yunho Lee, Che Ok Jeon: Solitalea longa sp. nov., isolated from freshwater and emended description of the genus Solitalea. IJSEM 68: 2826 - 2831 2018 ( DOI 10.1099/ijsem.0.002903 , PubMed 30016230 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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