Name: Sinomonas gamaensis NEAU-HV1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159682

Type strain:

Species: Sinomonas gamaensis

Strain Designation: NEAU-HV1

Culture col. no.: DSM 104514

Strain history: <- J. Zhao; Northeast Agricultural University, Harbin, Xiangfang District, P.R. CHINA; NEAU-HV1<-Y. Fu; School of Life Science, Northeast Agricultural University

Section

Sinomonas gamaensis NEAU-HV1 is a mesophilic bacterium that was isolated from Soil, cotton field.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Sinomonas*
	Species	"Sinomonas gamaensis"
	Full Scientific Name (LPSN)	Sinomonas gamaensis Fu et al. 2019

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66533]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #66533]

Culture medium growth

[Ref.: #66533]

Culture medium link

Medium recipe at MediaDive

[Ref.: #66533]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #66533]			growth	28 °C

[Ref.: #66533]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66533]	Sample type/isolated from	Soil, cotton field
[Ref.: #66533]	Geographic location (country and/or sea, region)	Gama, Hadjer Iamis region
[Ref.: #66533]	Country	Chad
[Ref.: #66533]	Country ISO 3 Code	TCD
[Ref.: #66533]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Shrub (Scrub)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66533]	Sinomonas sp. strain NEAU-HV1 16S ribosomal RNA gene, partial sequence	MF418645	1518	ENA	1914986 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Sinomonas gamaensis NEAU-HV1	GCA_005876955	scaffold	GenBank	2565624 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Sinomonas gamaensis NEAU-HV1 NCBI: GCA_005876955.1
[Ref.: #69480]	motile	no	54.429	no
[Ref.: #69480]	flagellated	no	94.632	no
[Ref.: #69480]	gram-positive	yes	89.898	no
[Ref.: #69480]	anaerobic	no	99.459	no
[Ref.: #69480]	aerobic	yes	95.413	no
[Ref.: #69480]	halophile	no	84.923	no
[Ref.: #69480]	spore-forming	no	91.467	no
[Ref.: #69480]	thermophile	no	97.446	yes
[Ref.: #69480]	glucose-util	yes	83.895	no
[Ref.: #69480]	glucose-ferment	no	85.339	no

Availability in culture collections External links

[Ref.: #66533]

Culture collection no.

DSM 104514

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66533

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 104514

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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