Name: Lentzea terrae NEAU-LZS 42
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159642

Type strain:

Species: Lentzea terrae

Strain Designation: NEAU-LZS 42

Culture col. no.: DSM 105696, CGMCC 4.7428, JCM 32385

Strain history: J. Zhao; Sch. of Life Sci., Northeast Agric. Univ., China; NEAU-LZS 42.

NCBI tax ID(s): 2200761 (species)

SI-ID 406435

DSM 105696

Section

Lentzea terrae NEAU-LZS 42 is an aerobe, spore-forming, mesophilic bacterium that forms filamentous colonies and was isolated from soil of Mount Song.

colony-forming
Gram-positive
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Lentzea*
	Species	**Lentzea terrae**
	Full Scientific Name (LPSN)	Lentzea terrae Li et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #66738]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #66738]	Cell length	2.2-2.3 µm

[Ref.: #66738]	Cell width	0.7-0.8 µm

[Ref.: #66738]	Cell shape	rod-shaped

[Ref.: #66738]	Motility	no

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Colony shape

filamentous

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

Benett's agar

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Culture medium growth

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Culture medium

Czapek's agar

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Culture medium growth

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Culture medium

ISP 1

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Culture medium growth

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Culture medium

ISP 2

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Culture medium growth

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Culture medium

ISP 3

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Culture medium growth

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Culture medium

ISP 4

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Culture medium growth

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Culture medium

ISP 6

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Culture medium growth

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Culture medium

ISP 7

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Culture medium growth

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Culture medium

Nutrient agar (NA)

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Culture medium growth

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Culture medium

ISP 5

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Culture medium growth

		Temperature
[Ref.: #66487]	growth	28 °C
[Ref.: #66738]	optimum	28 °C
[Ref.: #66738]	growth	15-45 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #66487]	Temperature range	mesophilic
[Ref.: #66738]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #66738]			optimum	7
[Ref.: #66738]			growth	7-11

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

[Ref.: #66738]	Spore description	spore chains in rod-shaped elements
[Ref.: #66738]	Ability of spore formation	yes
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100
[Ref.: #69481]	Ability of spore formation	yes Confidence in %97

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66738]		NaCl		growth	0-5	%(w/v)

[Ref.: #66738]	Observation	actinomycete that forms well developed, branched substrate hyphae and aerial mycelium
[Ref.: #67770]	Observation	quinones: MK-9(H₄), MK-9(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66738]	cellulose ChEBI	+	degradation
[Ref.: #66738]	creatine ChEBI	+	nitrogen source
[Ref.: #66738]	D-fructose ChEBI	-	carbon source
[Ref.: #66738]	D-galactose ChEBI	+	carbon source
[Ref.: #66738]	D-glucose ChEBI	+	carbon source
[Ref.: #66738]	D-mannitol ChEBI	+	carbon source
[Ref.: #66738]	D-mannose ChEBI	+	carbon source
[Ref.: #66738]	D-ribose ChEBI	-	carbon source
[Ref.: #66738]	D-sorbitol ChEBI	-	carbon source
[Ref.: #66738]	D-xylose ChEBI	-	carbon source
[Ref.: #66738]	esculin ChEBI	+	hydrolysis
[Ref.: #66738]	galactitol ChEBI	-	carbon source
[Ref.: #66738]	gelatin ChEBI	+	degradation
[Ref.: #66738]	glycine ChEBI	+	nitrogen source
[Ref.: #66738]	L-alanine ChEBI	+	nitrogen source
[Ref.: #66738]	L-arabinose ChEBI	-	carbon source
[Ref.: #66738]	L-arginine ChEBI	+	nitrogen source
[Ref.: #66738]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #66738]	L-aspartate ChEBI	+	nitrogen source
[Ref.: #66738]	L-glutamate ChEBI	+	nitrogen source
[Ref.: #66738]	L-glutamine ChEBI	+	nitrogen source
[Ref.: #66738]	L-proline ChEBI	+	nitrogen source
[Ref.: #66738]	L-rhamnose ChEBI	+	carbon source
[Ref.: #66738]	L-serine ChEBI	+	nitrogen source
[Ref.: #66738]	L-threonine ChEBI	+	nitrogen source
[Ref.: #66738]	L-tyrosine ChEBI	+	nitrogen source
[Ref.: #66738]	lactose ChEBI	+	carbon source
[Ref.: #66738]	maltose ChEBI	+	carbon source
[Ref.: #66738]	milk	-	degradation
[Ref.: #66738]	myo-inositol ChEBI	+	carbon source
[Ref.: #66738]	nitrate ChEBI	-	reduction
[Ref.: #66738]	raffinose ChEBI	+	carbon source
[Ref.: #66738]	starch ChEBI	+	hydrolysis
[Ref.: #66738]	sucrose ChEBI	+	carbon source
[Ref.: #66738]	tween 20 ChEBI	-	hydrolysis
[Ref.: #66738]	tween 40 ChEBI	-	hydrolysis
[Ref.: #66738]	tween 80 ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #66738]		hydrogen sulfide ChEBI	no

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #66738]		urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66487]	Sample type/isolated from	soil of Mount Song
[Ref.: #66487]	Geographic location (country and/or sea, region)	Mount Song, Dengfeng city, Henan province (34° 23' 31'' N; 112° 56' 07'' E)
[Ref.: #66487]	Country	China
[Ref.: #66487]	Country ISO 3 Code	CHN
[Ref.: #66487]	Continent	Asia
[Ref.: #66487]	Geographic location	34.3919°/112.9350°

[Ref.: #66738]	Sample type/isolated from	soil from Mount Song
[Ref.: #66738]	Geographic location (country and/or sea, region)	Mount Song, Dengfeng, Henan Province
[Ref.: #66738]	Country	China
[Ref.: #66738]	Country ISO 3 Code	CHN
[Ref.: #66738]	Continent	Asia
[Ref.: #66738]	Geographic location	34.4833°/113.0330°
[Ref.: #66738]	Enrichment culture	sodium succinate-asparagine agar
[Ref.: #66738]	Enrichment culture composition	cycloheximide (50 mgl-1) and nalidixic acid (20 mgl-1)
[Ref.: #66738]	Enrichment culture duration	21 days
[Ref.: #66738]	Enrichment culture temperature	28 ̊C
[Ref.: #66738]	Isolation/enrichment procedure	The soil sample was air-dried at room temperature for 14 days before isolation of actinomycetes. After drying of the soil, the new bacterial strain was isolated using the standard dilution plate method and grown on sodium succinate-asparagine agar supplemented with cycloheximide (50 mgl-1) and nalidixic acid (20 mgl-1). After 21 days of aerobic incubation at 28°C, colonies were transferred and purified on oatmeal agar.

[Ref.: #67770]	Sample type/isolated from	Soil of Mt. Song
[Ref.: #67770]	Geographic location (country and/or sea, region)	Henan Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66487]	Lentzea sp. strain NEAU-LZS 42 16S ribosomal RNA gene, partial sequence	MG271812	1509	ENA	56099 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lentzea terrae NEAU-LZS 42	GCA_003265345	scaffold	GenBank	2200761 tax ID

[Ref.: #66487]	GC-content	68.8 mol%
[Ref.: #66738]	GC-content	68.8 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	68.8 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Lentzea terrae NEAU-LZS 42 NCBI: GCA_003265345.1
[Ref.: #69481]	spore-forming	yes	97	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lentzea terrae NEAU-LZS 42 NCBI: GCA_003265345.1
[Ref.: #69480]	flagellated	no	96.175	yes
[Ref.: #69480]	gram-positive	yes	87.589	yes
[Ref.: #69480]	anaerobic	no	98.982	yes
[Ref.: #69480]	aerobic	yes	91.73	no
[Ref.: #69480]	halophile	no	87.575	no
[Ref.: #69480]	spore-forming	yes	93.969	no
[Ref.: #69480]	glucose-util	yes	88.318	yes
[Ref.: #69480]	thermophile	no	99.271	yes
[Ref.: #69480]	motile	no	88.696	no
[Ref.: #69480]	glucose-ferment	no	91.745	no

Availability in culture collections External links

[Ref.: #66487]

Culture collection no.

DSM 105696, CGMCC 4.7428, JCM 32385

[Ref.: #112116]

SI-ID 406435

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lentzea terrae sp. nov., isolated from soil and an emended description of Lentzea soli.	Li D, Jiang H, Han L, Li Y, Zhao J, Jiang S, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.003024	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66487

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105696

#66738

Dongmei Li, Hao Jiang, Liyuan Han, Yuanyuan Li, Junwei Zhao, Shanwen Jiang, Xiangjing Wang, Wensheng Xiang: Lentzea terrae sp. nov., isolated from soil and an emended description of Lentzea soli. IJSEM 68: 3528 - 3533 2018 ( DOI 10.1099/ijsem.0.003024 , PubMed 30231959 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#112116

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406435.1 )

* These data were automatically processed and therefore are not curated

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