Streptomyces altiplanensis (DSM 107267, CECT 9647, HST21)

Name: Streptomyces altiplanensis (DSM 107267, CECT 9647, HST21)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159629

Type strain

Strain Designation HST21

Culture col. no. DSM 107267 CECT 9647 HST21

NCBI tax ID(s) 1854571

Special Collections DSMZ Wink compendium Literature strains

History <- I. Nouioui, Univ. Newcastle, Newcastle upon Tyne, UK; HST21 <- C. Cortes, Universidad de Chile; HST21

Links

Streptomyces altiplanensis HST21 is an aerobe, spore-forming, mesophilic prokaryote that builds an aerial mycelium and was isolated from soil.

spore-forming aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398509

CECT 9647,DSM 107267

@ref 20215

Last LPSN update 2026-02-09 11:38:41

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces altiplanensis

Full scientific name Streptomyces altiplanensis Cortés-Albayay et al. 2019

Morphology

Colony morphology

@ref	Colony color	Medium used
69237	Chocolate brown (8017)	suter with tyrosine
69237	Black brown (8022), olive brown (8008)	ISP 7
69237	Black brown (8022)	suter without tyrosine
69237	Beige (1001)	ISP 2
69237	Mahogany brown (8016)	ISP 4
69237	Mahogany brown (8016)	ISP 5
69237	Nut brown (8011), agate grey (7038)	ISP 3

Multicellular morphology

@ref	Complex name	Complex color	Medium name
69237	Aerial mycelium		ISP 2
69237	Aerial mycelium	Grey white (9002)	ISP 3
69237	Aerial mycelium	Cream (9001)	ISP 4
69237	Aerial mycelium		ISP 5
69237	Aerial mycelium		ISP 7
69237	Aerial mycelium		suter with tyrosine
69237	Aerial mycelium		suter without tyrosine

Pigmentation

@ref	Color	Name
67995		diffusible pigments
69237		melanin pigment
69237	Copper brown (8004), signal brown (8002), ochre brown (8001), clay brown (8003), chestnut brown (8015)	soluble pigment

Multimedia

@ref:	66465
multimedia content:	DSM_107267.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_107267.jpg
caption:	Medium 65 28°C
intellectual property rights:	Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66465	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
66465	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
66465	positive	growth	28	mesophilic
67995	positive	growth	28-37	mesophilic
67995	positive	minimum	25	mesophilic
67995	positive	maximum	45	thermophilic

Culture pH

@ref	Ability	Type	PH	PH range
67995	positive	optimum	9.0-11.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67995	aerobe
125438	aerobe	90.7

Spore formation

@ref	Spore description	Spore formation	Confidence
67995	rectiflexible spore chains in section with spiny spore surfaces
125438			90.023

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69237	NaCl	positive	growth	0-2.5 %

Observation

@ref	Observation
67995	Whole-cell hydrolysates are rich in LL-diaminopimelic acid in its peptidoglycan and glucose and ribose in its cell-wall sugars
67995	It is characterized by the presence of DPG, PME, PE, PI, GPLs and unknown lipids and phospholipids as polar lipids
67995	The menaquinone profile contained MK-9 (H6), MK-9(H8), MK-9(H4), MK-7(H2), MK-8(H2), MK-9(H2) and MK-10
67995	On ISP 1 Substrate mycelium colour: Deep reddish brown, Aerial mycelium colour: dark brown, diffusible pigments: strong reddish brown
67995	On ISP 2 Substrate mycelium colour: white , Aerial mycelium colour: white, diffusible pigments: no
67995	On ISP 3 Aerial mycelium colour: white, diffusible pigments: deep reddish brown
67995	On ISP 4 Substrate mycelium colour: dark greyish yellow, Aerial mycelium colour: light greyish olive, diffusible pigments: vivid greenish yellow
67995	On ISP 5 Substrate mycelium colour: light olive brown, Aerial mycelium colour: strong yellowish brown, diffusible pigments: strong yellow
67995	On ISP 7 Substrate mycelium colour: dark yellowish brown, Aerial mycelium colour: light olive brown, diffusible pigments: dark yellow
67995	On GYM Substrate mycelium colour: strong brown, Aerial mycelium colour: white, diffusible pigments: deep reddish brown

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
67995	17521 ChEBI	(-)-quinic acid	+	assimilation
67995		1 % sodium lactate	+	growth
67995	64552 ChEBI	alpha-hydroxybutyrate	+	assimilation
69237	22599 ChEBI	arabinose	+/-	growth
67995	161680 ChEBI	aztreonam	+	growth
67995	8295 ChEBI	beta-hydroxybutyrate	+	assimilation
67995	17968 ChEBI	butyrate	+	assimilation
69237	62968 ChEBI	cellulose	-	growth
67995	15824 ChEBI	D-fructose	+	carbon source
67995	12936 ChEBI	D-galactose	+	carbon source
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
69237	28757 ChEBI	fructose	+	growth
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
69237	17234 ChEBI	glucose	+	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69237	17268 ChEBI	inositol	-	growth
67995	16467 ChEBI	L-arginine	+	nitrogen source
67995	18183 ChEBI	L-pyroglutamic acid	+	assimilation
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
67995	48607 ChEBI	lithium chloride	+	growth
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69237	37684 ChEBI	mannose	+/-	growth
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
67995	16634 ChEBI	raffinose	+	carbon source
69237	16634 ChEBI	raffinose	+	growth
69237	26546 ChEBI	rhamnose	+/-	growth
67995	75229 ChEBI	sodium bromate	+	growth
67995	17164 ChEBI	stachyose	+	carbon source
67995	17992 ChEBI	sucrose	+	carbon source
69237	17992 ChEBI	sucrose	+	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
67995	53423 ChEBI	tween 40	+	growth
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
69237	18222 ChEBI	xylose	-	growth

Enzymes

@ref	Value	Activity	Ec
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69237	-	-	-	+	-	+	+	+	-	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69237	not determinedn.d.	+	+	+	+/-	+	+/-	-	-	-	+/-	+	-	+	-	+/-	+/-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
66465	soil	Tarapaca Region, Salar de Huasco (20° 19' 43'' N, 68° 50' 19'' W)	Chile	CHL	Middle and South America	20.3286	-68.8386 20.3286/-68.8386
67995	hyper arid soil of the Salar de Huasco, (3800 m.a.s.l)	Atacama Desert	Chile	CHL	Middle and South America

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID
67995	ASM371939v1 assembly for Streptomyces altiplanensis HST21	contig	GCA_003719395	1854571.5	8023519376	1854571

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66465	Streptomyces altiplanensis strain HST21 16S ribosomal RNA gene, complete sequence	KX130868.2	1530		1854571

GC content

@ref	GC-content (mol%)	Method
66465	71.0	sequence analysis
67995	71	genome sequence analysis

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces altiplanensis HST21
NCBI: GCA_003719395.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.17	no
125438	anaerobic	anaerobicⓘ	no	95.36	yes
125438	aerobic	aerobicⓘ	yes	90.70	no
125438	spore-forming	spore-formingⓘ	yes	90.02	no
125438	thermophilic	thermophileⓘ	no	97.50	no
125438	flagellated	motile2+ⓘ	no	87.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces altiplanensis sp. nov., an alkalitolerant species isolated from Chilean Altiplano soil, and emended description of Streptomyces chryseus (Krasil'nikov et al. 1965) Pridham 1970.	Cortes-Albayay C, Dorador C, Schumann P, Schniete JK, Herron P, Andrews B, Asenjo J, Nouioui I	Int J Syst Evol Microbiol	10.1099/ijsem.0.003525	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66465	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107267
#67995	Carlos Cortés-Albayay, Cristina Dorador, Peter Schumann, Jana K. Schniete, Paul Herron, Barbara Andrews, Juan Asenjo, Imen Nouioui: Streptomyces altiplanensis sp. nov., an alkalitolerant species isolated from Chilean Altiplano soil, and emended description of Streptomyces chryseus (Krasil'nikov et al. 1965) Pridham 1970. IJSEM 69: 2498 - 2505 2019 ( DOI 10.1099/ijsem.0.003525 )
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69237	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces altiplanensis (DSM 107267, CECT 9647, HST21)

Name and taxonomic classification

Morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003719395

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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