Streptomyces huasconensis (DSM 107268, CECT 9648, HST28)

Name: Streptomyces huasconensis (DSM 107268, CECT 9648, HST28)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159625

Type strain

Strain Designation HST28

Culture col. no. DSM 107268 CECT 9648 HST28

NCBI tax ID(s) 1854574

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Streptomyces huasconensis HST28 is an aerobe, mesophilic, Gram-positive prokaryote that builds an aerial mycelium and was isolated from soil.

Gram-positive aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 401780

CECT 9648,DSM 107268

@ref 20215

Last LPSN update 2025-12-16 10:08:18

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces huasconensis

Full scientific name Streptomyces huasconensis Cortés-Albayay et al. 2019

Morphology

Cell morphology

@ref	Gram stain	Confidence
67976	positive
125439	positive	99.8
125439		92.8

Colony morphology

@ref	Colony color	Incubation period	Medium used
69240	Fawn brown (8007)		suter with tyrosine
69240	Fawn brown (8007)		suter without tyrosine
69240	Black brown (8022)		ISP 7
69240	Black brown (8022)		ISP 4
69240	Black brown (8022)		ISP 5
69240	Beige (1001)		ISP 6
67976	pinkish-white	7 days	GYM agar
69240	Ochre brown (8001)		ISP 3
69240	Sepia brown (8014)		ISP 2

Multicellular morphology

@ref	Complex name	Complex color	Medium name
69240	Aerial mycelium	Cream (9001), reed green (6013), yellow grey (7034)	ISP 2
69240	Aerial mycelium	Cream (9001), light pink (3015)	ISP 3
69240	Aerial mycelium	Pure white (9010)	ISP 4
69240	Aerial mycelium	Pure white (9010), pebble grey (7032)	ISP 5
69240	Aerial mycelium		ISP 6
69240	Aerial mycelium	Cream (9001), yellow grey (7034)	ISP 7
69240	Aerial mycelium	Cream (9002)	suter with tyrosine
69240	Aerial mycelium	Cream (9001)	suter without tyrosine

Pigmentation

@ref	Production	Color	Name
69240			Melanin
69240		Fawn brown (8007)	soluble pigment

Multimedia

@ref:	66460
multimedia content:	DSM_107268.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_107268.jpg
caption:	Medium 65 28°C
intellectual property rights:	Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
66460	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
66460	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
66460	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 20.0 g/l Starch 10.0 g/l (NH4)2SO4 2.0 g/l CaCO3 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 1.0 g/l NaCl 1.0 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l ZnSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
66460	positive	growth	28	mesophilic
67976	positive	optimum	28	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
67976	positive	optimum	8.0-9.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67976	aerobe
125439	obligate aerobe	96.7

Halophily

@ref	Salt	Growth	Tested relation	Concentration
67976	NaCl	positive	optimum	10 %(w/v)
69240	NaCl	positive	growth	0-5 %

Observation

@ref	Observation
67976	aerial mycelium
67976	ll-diaminopimelic acid in its peptidoglycan layer
67976	galactose, glucose, ribose and traces of arabinose and mannose as whole-cell sugars
67976	the polar lipid profile contains phosphatidylmethylethanolamine, phosphatidylinositol, aminolipid, glycophospholipid and an unidentified lipid
67976	MK-9(H6), MK-9(H8) and MK-9(H4) are the predominating menaquinones

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
67976	13705 ChEBI	acetoacetate	+	builds acid from
69240	22599 ChEBI	arabinose	+	growth
67976	161680 ChEBI	aztreonam	+	growth
69240	62968 ChEBI	cellulose	-	growth
67976	15824 ChEBI	D-fructose	+	carbon source
67976	78697 ChEBI	D-fructose 6-phosphate	+	carbon source
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
69240	28757 ChEBI	fructose	+	growth
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
69240	17234 ChEBI	glucose	+	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69240	17268 ChEBI	inositol	+	growth
67976		L-alanine 4-nitroanilide	+	nitrogen source
67976	16467 ChEBI	L-arginine	+	nitrogen source
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
67976	48607 ChEBI	lithium chloride	+	growth
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69240	37684 ChEBI	mannose	+	growth
67976	17268 ChEBI	myo-inositol	+	carbon source
67976	100147 ChEBI	nalidixic acid	+	growth
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
69240	16634 ChEBI	raffinose	-	growth
69240	26546 ChEBI	rhamnose	-	growth
69240	17992 ChEBI	sucrose	-	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
67976	75198 ChEBI	tetrazolium blue	+	growth
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
69240	18222 ChEBI	xylose	+	growth

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68382	beta-galactosidase	-	3.2.1.23	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68382	esterase (C 4)	+		from API zym
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne

Fatty acid profile

Metadata FA analysis

@ref

67976

Fatty acid	Percentage
C15:0 anteiso	31.8
C17:0 anteiso	18.3
C16:0 iso	10.1
C15:0 iso	8.2
C17:1 anteiso C	8.1
C16:0	5
C16:0 9-methyl	4.3
C17:0 iso	4.1
C16:1 w9c	3.3
C16:1 iso H	1.6
C14:0 iso	1.2
C15:0	1
C17:0 cyclo	0.7
C17:1 w9c	0.4
C11:0 iso	0.4
C14:0	0.3
C17:0	0.3
C13:0 anteiso	0.2
C13:0 iso	0.2

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69240	-	-	-	+	-	-	-	-	-	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69240	not determinedn.d.	+	+	+/-	-	+	+/-	+/-	+	-	+	+	-	-	-	-	-	+	+/-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
66460	soil	Tarapaca Region, Salar de Huasco (20° 19' 43'' S, 68° 50' 19'' W)	Chile	CHL	Middle and South America	-20.3287	-68.8386 -20.3287/-68.8386
67976	arid soil samples, in complete absence of vegetation, in an athalassohaline and polyextreme high-altitude saline wetland (3800 m.a.s.l)	Salar de Huasco, Altiplano, the high plateau of the Andes	Peru	PER	Middle and South America	-20.3286	-68.8386 -20.3286/-68.8386

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID
67976	ASM401027v1 assembly for Streptomyces huasconensis HST28	contig	GCA_004010275	1854574.5	2866435396	1854574

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66460	Streptomyces huasconensis strain HST28 16S ribosomal RNA gene, complete sequence	KX130877	1517		1854574

GC content

@ref	GC-content (mol%)	Method
66460	71.5	sequence analysis
67976	71.5	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces huasconensis HST28
NCBI: GCA_004010275

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	88.80	no
125439	motility	BacteriaNetⓘ	no	92.80	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.70	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Antimicrobial Activity and Identification of the Biosynthetic Gene Cluster of X-14952B From Streptomyces sp. 135.	Li N, Chen S, Yan Z, Han J, Ta Y, Pu T, Wang Y	Front Microbiol	10.3389/fmicb.2021.703093	2021
Transcriptome	Cutting the Gordian knot: early and complete amino acid sequence confirmation of class II lasso peptides by HCD fragmentation.	Jarmusch SA, Feldmann I, Blank-Landeshammer B, Cortes-Albayay C, Castro JF, Andrews B, Asenjo JA, Sickmann A, Ebel R, Jaspars M	J Antibiot (Tokyo)	10.1038/s41429-020-00369-z	2020
Phylogeny	Downsizing Class II Lasso Peptides: Genome Mining-Guided Isolation of Huascopeptin Containing the First Gly1-Asp7 Macrocycle.	Cortes-Albayay C, Jarmusch SA, Trusch F, Ebel R, Andrews BA, Jaspars M, Asenjo JA	J Org Chem	10.1021/acs.joc.9b02231	2020
Phylogeny	Streptomyces huasconensis sp. nov., an haloalkalitolerant actinobacterium isolated from a high altitude saline wetland at the Chilean Altiplano.	Cortes-Albayay C, Dorador C, Schumann P, Andrews B, Asenjo J, Nouioui I	Int J Syst Evol Microbiol	10.1099/ijsem.0.003468	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66460	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107268
#67976	Carlos Cortés-Albayay, Cristina Dorador, Peter Schumann, Barbara Andrews, Juan Asenjo, Imen Nouioui: Streptomyces huasconensis sp. nov., an haloalkalitolerant actinobacterium isolated from a high altitude saline wetland at the Chilean Altiplano. IJSEM 69: 2315 - 2322 2019 ( DOI 10.1099/ijsem.0.003468 )
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69240	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces huasconensis (DSM 107268, CECT 9648, HST28)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Enzymes

Fatty acid profile?

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_004010275

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media

Fatty acid profile