Cellulosimicrobium funkei (DSM 105328, WB02_D5-03-AE)

Name: Cellulosimicrobium funkei (DSM 105328, WB02_D5-03-AE)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159596

Type strain

Strain Designation WB02_D5-03-AE

Culture col. no. DSM 105328 WB02_D5-03-AE

NCBI tax ID(s) 264251

Special Collections DSMZ Pig DZIF

History <- E. Allen-Vercoe, Univ. Guelph, Ontario, Canada; WB02_D5-03-AE

Links

Cellulosimicrobium funkei WB02_D5-03-AE is a bacterium that was isolated from wild boar.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 398617

DSM 105328

@ref 20215

Last LPSN update 2026-02-09 11:38:40

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Promicromonosporaceae

Genus Cellulosimicrobium

Species Cellulosimicrobium funkei

Full scientific name Cellulosimicrobium funkei Brown et al. 2006

Synonyms (1)

Cellulosimicrobium aquatile

BacDive ID	Other strains from **Cellulosimicrobium funkei** (10)	Type strain
12581	C. funkei C8821, W6122, DSM 16025, ATCC BAA-886, CCUG ... (type strain)
135381	C. funkei 896.84, CIP 101288
135494	C. funkei 881.84, CIP 101208
137362	C. funkei 833.84, CIP 101186
139140	C. funkei 843.84, CIP 101185
139141	C. funkei R520, CIP 102520
139165	C. funkei R682, CIP 102521
139167	C. funkei R860, CIP 102522
155770	C. funkei CCUG 59260
164257	C. funkei JCM 32432, KCTC 39527, LMG 28646, MCC 2761

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66422	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
66422	positive	growth	37

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	+	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	+	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	+	fermentation	from API Coryne
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
68379	17992 ChEBI	sucrose	+	fermentation	from API Coryne
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne

Enzymes

@ref	Value	Activity	Ec
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68379	gelatinase	+		from API Coryne
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68379	pyrazinamidase	+	3.5.1.B15	from API Coryne
68379	urease	-	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
66422	+	+	+/-	+	-	+	+	+	+	-	+	-	+	+	+	-	+	-	+	+/-	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66422	wild boar	Stratford, Ontario	Canada	CAN	North America

Taxonmaps

69479

Global distribution of 16S sequence MN537484 (>99% sequence identity) for Cellulosimicrobium from Microbeatlas

Aquatic Samples	417
Soil Samples	1873
Animal Samples	1680
Plant Samples	1505
Total Samples	5475

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Biosafety level	Biosafety level comment
66422	yes, in single cases	yes, in single cases	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66422	Cellulosimicrobium sp. strain DSM 105328 16S ribosomal RNA gene, partial sequence	MN537484	1425		1871614

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66422	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105328
#68379	Automatically annotated from API Coryne .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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