Streptomyces chumphonensis (DSM 111119, JCM 18522, PCU 330)

Name: Streptomyces chumphonensis (DSM 111119, JCM 18522, PCU 330)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159593

Type strain

Strain Designation KK1-2

Culture col. no. DSM 111119 JCM 18522 PCU 330 TISTR 2106 KK1-2

NCBI tax ID(s) 1214925

Special Collections DSMZ JCM

History <-JCM<-S. Tanasupawat; Chulalongkorn Univ, Thailand. S. Tanasupawat; Chulalongkorn Univ., Thailand; KK1-2.

Links

Streptomyces chumphonensis KK1-2 is a mesophilic prokaryote that was isolated from Marine sediments.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 397342

JCM 18522,DSM 111119

@ref 20215

Last LPSN update 2026-02-09 11:38:40

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces chumphonensis

Full scientific name Streptomyces chumphonensis Phongsopitanun et al. 2014

BacDive ID	Other strains from **Streptomyces chumphonensis** (1)	Type strain
162262	S. chumphonensis JCM 18521

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		92.6
125438		92.144	positive

Multimedia

@ref:	66419
multimedia content:	DSM_111119.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_111119.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
66419	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
66419	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water
66419	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
66419	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	90.219

Observation

67770

Observationquinones: MK-9(H₆), MK-9(H₈)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66419	Marine sediments	Chumphon Province, Thailand	Thailand	THA	Asia
67770	Marine sediments in Chumphon Province		Thailand	THA	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
66419	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1477971v1 assembly for Streptomyces chumphonensis KK1-2	contig	GCA_014779715	1214925.4	2990039272	1214925	68.01
124043	ASM4268516v1 assembly for Streptomyces chumphonensis TISTR 2106	scaffold	GCA_042685165			1214925	59.45
124043	ASM3954380v1 assembly for Streptomyces chumphonensis JCM 18522	scaffold	GCA_039543805			1214925	53.85

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66419	Streptomyces chumphonensis gene for 16S rRNA, partial sequence, strain: KK1-2	AB738400	1475		1214925

GC content

@ref	GC-content (mol%)	Method
66419	73.3	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces chumphonensis KK1-2
NCBI: GCA_014779715.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.14	no
125438	anaerobic	anaerobicⓘ	no	97.91	no
125438	aerobic	aerobicⓘ	yes	90.22	no
125438	spore-forming	spore-formingⓘ	yes	89.31	no
125438	thermophilic	thermophileⓘ	no	93.07	yes
125438	flagellated	motile2+ⓘ	no	92.60	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Metabolites Discovery from Streptomyces xanthus: Exploring the Potential of Desert Microorganisms.	Luo X, Liu Z, Xia Z, Luo X, Zhang J, Chen A, Wang H, Wan C, Zhang L.	Biology (Basel)	10.3390/biology14020164	2025
	Exploring the Trends in Actinobacteria as Biological Control Agents of Phytopathogenic Fungi: A (Mini)-Review.	Giacomelli Ribeiro H, Teresinha Van Der Sand S.	Indian J Microbiol	10.1007/s12088-023-01166-6	2024
	Aromatic Acids and Leucine Derivatives Produced from the Deep-Sea Actinomycetes Streptomyceschumphonensis SCSIO15079 with Antihyperlipidemic Activities.	Su Z, Li K, Luo X, Zhu Y, Mai SY, Zhu Q, Yang B, Zhou X, Tao H.	Mar Drugs	10.3390/md20040259	2022
Biotechnology	GC/MS Fatty Acid Profile of Marine-Derived Actinomycetes from Extreme Environments: Chemotaxonomic Insights and Biotechnological Potential.	Cunha MB, Jorge AF, Nunes MJ, Sousa JR, Lanca MJ, Gomes da Silva M, Gaudencio SP.	Mar Drugs	10.3390/md23010001	2024
	Taxonomic characterization and antimicrobial compound production from Streptomyces chumphonensis BDK01 isolated from marine sediment.	Manikandan M, Gowdaman V, Duraimurugan K, Prabagaran SR.	3 Biotech	10.1007/s13205-019-1687-7	2019
	Bacterial diversity and chemical ecology of natural product-producing bacteria from Great Salt Lake sediment.	Bring Horvath ER, Brazelton WJ, Kim MC, Cullum R, Mulvey MA, Fenical W, Winter JM.	ISME Commun	10.1093/ismeco/ycae029	2024
Metabolism	The Diversity, Metabolomics Profiling, and the Pharmacological Potential of Actinomycetes Isolated from the Estremadura Spur Pockmarks (Portugal).	Pinto-Almeida A, Bauermeister A, Luppino L, Grilo IR, Oliveira J, Sousa JR, Petras D, Rodrigues CF, Prieto-Davo A, Tasdemir D, Sobral RG, Gaudencio SP.	Mar Drugs	10.3390/md20010021	2021
Phylogeny	Stability of Microbial Community Profiles Associated with Compacted Bentonite from the Grimsel Underground Research Laboratory.	Engel K, Ford SE, Coyotzi S, McKelvie J, Diomidis N, Slater G, Neufeld JD.	mSphere	10.1128/msphere.00601-19	2019
	Streptomyces meridianus sp. nov. isolated from brackish water of the Tagus estuary in Alcochete, Portugal.	Santos JDND, Klimek D, Calusinska M, Lobo-da-Cunha A, Catita J, Goncalves H, Gonzalez I, Reyes F, Lage OM.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005987	2023
Biotechnology	Discovery of Streptomyces marinisediminis sp. nov., a new thiolutin producing actinomycete isolated from Thai marine sediment	Pansomsuay R, Fukasem P, Pittayakhajonwut P, Intaraudom C, Suriyachadkun C, Yasawong M, He Y, Tanasupawat S, Qian Y, Thawai C.	Sci Rep		2025
Phylogeny	Streptomyces durbertensis sp. nov., isolated from saline-alkali soil.	Yu Y, Fu Y, Guo X, Yan R, Wang H, Zhao J, Wang X, Zhang J, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.003047	2018
Phylogeny	Streptomyces chumphonensis sp. nov., isolated from marine sediments.	Phongsopitanun W, Thawai C, Suwanborirux K, Kudo T, Ohkuma M, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijs.0.062992-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66419	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111119
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces chumphonensis (DSM 111119, JCM 18522, PCU 330)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014779715

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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