Bilifractor porci (DSM 106898, OIL+RF-744-WCA-13, JCM 34419)

Name: Bilifractor porci (DSM 106898, OIL+RF-744-WCA-13, JCM 34419)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159487

Type strain

Strain Designation OIL+RF-744-WCA-13, OiL+RF-744-WCA-WT-13

Culture col. no. DSM 106898 OIL+RF-744-WCA-13 JCM 34419 OiL+RF-744-WCA-WT-13

NCBI tax ID(s) 2606636

Special Collections DSMZ JCM Pig DZIF

History DSMZ <- T. Clavel , RWTH Aachen, Germany; JCM <-- B. Abt; DSMZ, Germany; DSM 106898 (=Oil+RF-744-WCA-WT-13) <-- T. Clavel; RWTH Aachen, Germany.

Links

Bilifractor porci OIL+RF-744-WCA-13 is a bacterium that was isolated from Aachener Minipig, WT, 4 months old, feces.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 401719

JCM 34419,DSM 106898

@ref 20215

Last LPSN update 2026-05-29 08:44:12

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Lachnospiraceae

Genus Bilifractor

Species Bilifractor porci

Full scientific name Bilifractor porci Wylensek et al. 2021

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66310	FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)		Medium recipe at MediaDive	Name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a) Composition: Fastidious Anaerobe Basal Broth 35.4 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
66310	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	anaerobe	93.439
125439	obligate anaerobe	98.511

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66310	Aachener Minipig, WT, 4 months old, feces	Aachen	Germany	DEU	Europe
67770	Feces of an Aachen minipig in Germany

Taxonmaps

69479

Global distribution of 16S sequence MN537522 (>99% sequence identity) for Syntrophococcus from Microbeatlas

Aquatic Samples	701
Soil Samples	555
Animal Samples	15293
Plant Samples	452
Total Samples	17001

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM969600v1 assembly for Bilifractor porci Oil+RF-744-WCA-WT-13	contig	GCA_009696005	2606636.3	2936248790	2606636	74.13

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66310	Bilifractor porci strain Oil+RF-744-WCA-WT-13 16S ribosomal RNA gene, partial sequence	MN537522	1501		2652304

GC content

@ref	GC-content (mol%)	Method
67770	50.4	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM969600v1 assembly for Bilifractor porci Oil+RF-744-WCA-WT-13
BV-BRC: 2606636.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	98.51	no
125439	motility	BacteriaNetⓘ	yes	68.63	no
125439	gram_stain	BacteriaNetⓘ	variable	51.47	no
125439	spore_formation	BacteriaNetⓘ	yes	53.68	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lachnospiraceae bacterium Oil+RF-744-WCA-WT-13 strain Oil+RF-744-WCA-WT-13 strain Oil+RF-744-WCA-WT-13 strain Oil+RF-744-WCA-WT-13
PATRIC: 2606636.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	79.21	no
125438	anaerobic	anaerobicⓘ	yes	93.44	no
125438	spore-forming	spore-formingⓘ	no	70.48	no
125438	aerobic	aerobicⓘ	no	97.01	no
125438	thermophilic	thermophileⓘ	no	94.04	no
125438	flagellated	motile2+ⓘ	no	84.22	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66310	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 106898
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us