Name: Anaerohalosphaera lusitana ST-NAGAB-D1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159440

Type strain:

Species: Anaerohalosphaera lusitana

Strain Designation: ST-NAGAB-D1

Culture col. no.: DSM 103484, JCM 31926, KCTC 15600

Strain history: <- Stefan Spring, DSM

NCBI tax ID(s): 1936003 (species)

SI-ID 405123

DSM 103484

Section

Anaerohalosphaera lusitana ST-NAGAB-D1 is an anaerobe, mesophilic, motile bacterium that was isolated from anoxic mud of evaporation pond.

motile
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Planctomycetota*
	Class	*Phycisphaerae*
	Order	*Sedimentisphaerales*
	Family	*Anaerohalosphaeraceae*
	Genus	*Anaerohalosphaera*
	Species	**Anaerohalosphaera lusitana**
	Full Scientific Name (LPSN)	Anaerohalosphaera lusitana Pradel et al. 2020

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.953

[Ref.: #67771]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66263]

Culture medium

SEDIMENTISPHAERA (L21 HS) MEDIUM (DSMZ Medium 1527)

[Ref.: #66263]

Culture medium growth

[Ref.: #66263]

Culture medium link

Medium recipe at MediaDive

[Ref.: #66263]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #66263]			growth	35 °C
[Ref.: #67771]			growth	35 °C

[Ref.: #66263]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %98.893

[Ref.: #67771]	Ability of spore formation	no
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.986
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66263]	Sample type/isolated from	anoxic mud of evaporation pond
[Ref.: #66263]	Geographic location (country and/or sea, region)	Salinas de Tavira
[Ref.: #66263]	Country	Portugal
[Ref.: #66263]	Country ISO 3 Code	PRT
[Ref.: #66263]	Continent	Europe
[Ref.: #66263]	Geographic location	37.1210°/-7.6359°

[Ref.: #67771]	Sample type/isolated from	From anoxic sediment of evaporation pond, solar saltern
[Ref.: #67771]	Geographic location (country and/or sea, region)	Tavira
[Ref.: #67771]	Country	Portugal
[Ref.: #67771]	Country ISO 3 Code	PRT
[Ref.: #67771]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Mud (Sludge)
#Environmental	#Aquatic	#Pond (small)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KY471010 (>99% sequence identity) for Anaerohalosphaera lusitana subclade from Microbeatlas

Aquatic Samples	1181
Soil Samples	87
Animal Samples	7
Plant Samples	21
Total Samples	1296

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66263]	Phycisphaerae bacterium ST-NAGAB-D1 16S ribosomal RNA gene, partial sequence	KY471010	1532	ENA	1936003 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Anaerohalosphaera lusitana ST-NAGAB-D1	GCA_002007645	complete	GenBank	1936003 tax ID	*
[Ref.: #66792]	Phycisphaerae bacterium ST-NAGAB-D1 strain ST-NAGAB-D1	1936003.3	complete	PATRIC	1936003 tax ID	*

[Ref.: #66263]	GC-content	52.0 mol%	sequence analysis
[Ref.: #67771]	GC-content	52.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Anaerohalosphaera lusitana ST-NAGAB-D1 NCBI: GCA_002007645.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Anaerohalosphaera lusitana ST-NAGAB-D1 NCBI: GCA_002007645.1
[Ref.: #69480]	flagellated	no	84.89	no
[Ref.: #69480]	gram-positive	no	98.568	yes
[Ref.: #69480]	anaerobic	yes	97.765	yes
[Ref.: #69480]	aerobic	no	94.817	yes
[Ref.: #69480]	halophile	no	80.835	no
[Ref.: #69480]	spore-forming	no	94.029	yes
[Ref.: #69480]	glucose-util	yes	80.892	no
[Ref.: #69480]	thermophile	no	54.065	yes
[Ref.: #69480]	motile	yes	69.927	no
[Ref.: #69480]	glucose-ferment	no	71.101	no

Availability in culture collections External links

[Ref.: #66263]

Culture collection no.

DSM 103484, JCM 31926, KCTC 15600

[Ref.: #111934]

SI-ID 405123

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Anaerohalosphaera lusitana gen. nov., sp. nov., and Limihaloglobus sulfuriphilus gen. nov., sp. nov., isolated from solar saltern sediments, and proposal of Anaerohalosphaeraceae fam. nov. within the order Sedimentisphaerales.	Pradel N, Fardeau ML, Tindall BJ, Spring S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003919	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66263

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103484

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#111934

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405123.1 )

* These data were automatically processed and therefore are not curated

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