Staphylococcus cohnii (DSM 107449, McC-251-APC-3A2)

Name: Staphylococcus cohnii (DSM 107449, McC-251-APC-3A2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159345

Type strain

Strain Designation McC-251-APC-3A2

Culture col. no. DSM 107449 McC-251-APC-3A2

NCBI tax ID(s) 29382

Special Collections DSMZ Pig DZIF

History <- T. Clavel , TU Munich, Freising-Weihenstephan, Germany;

Links

Staphylococcus cohnii McC-251-APC-3A2 is a mesophilic prokaryote that was isolated from feces; pig, 10 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli protein.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 408162

DSM 107449

@ref 20215

Last LPSN update 2026-02-09 11:38:36

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Staphylococcaceae

Genus Staphylococcus

Species Staphylococcus cohnii

Full scientific name Staphylococcus cohnii Schleifer and Kloos 1975 (Approved Lists 1980)

BacDive ID	Other strains from **Staphylococcus cohnii** (16)	Type strain
14518	S. cohnii GH 137, GH137, DSM 20260, ATCC 29974, CCM ... (type strain)
14519	S. cohnii AW 81, DSM 20261, ATCC 29973
14520	S. cohnii DM 58, DSM 20262, ATCC 29972, CCUG 35145
14612	S. cohnii ES2-13a1, DSM 30608
14613	S. cohnii K2-1, DSM 30902
130700	S. cohnii G18, DSM 31026
148258	S. cohnii CCUG 35116
153102	S. cohnii CCUG 48496
153115	S. cohnii CCUG 48522
153893	S. cohnii CCUG 51542
153962	S. cohnii CCUG 51778
155162	S. cohnii CCUG 56667
156192	S. cohnii CCUG 60671
156877	S. cohnii CCUG 66263
157960	S. cohnii H62, DSM 103510
172319	S. cohnii CIMB145, CIMB 04-2594, CRBIP17.145

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66168	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
66168	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
66168	positive	growth	37	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66168	feces; pig, 10 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli (APC) protein	Kranzberg (Bavaria)	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence MN537537 (>99% sequence identity) for Staphylococcus from Microbeatlas

Aquatic Samples	20
Soil Samples	26
Animal Samples	679
Plant Samples	34
Total Samples	759

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM969566v1 assembly for Staphylococcus sp. McC-251-APC-3A2 McC-251-APC-3A2 (aerob)	contig	GCA_009695665	2606623.3	8035884122	2606623	73.75

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66168	Staphylococcus cohnii strain DSM 107449 16S ribosomal RNA gene, partial sequence	MN537537	1502		29382

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Staphylococcus sp. McC-251-APC-3A2 strain McC-251-APC-3A2 (aerob) strain McC-251-APC-3A2 (aerob) strain McC-251-APC-3A2 (aerob)
PATRIC: 2606623.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	56.10	no
125439	motility	BacteriaNetⓘ	yes	54.00	no
125439	gram_stain	BacteriaNetⓘ	positive	82.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	82.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Staphylococcus sp. McC-251-APC-3A2 strain McC-251-APC-3A2 (aerob) strain McC-251-APC-3A2 (aerob) strain McC-251-APC-3A2 (aerob)
PATRIC: 2606623.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	80.47	no
125438	anaerobic	anaerobicⓘ	no	97.69	no
125438	spore-forming	spore-formingⓘ	no	73.03	no
125438	aerobic	aerobicⓘ	yes	63.54	no
125438	thermophilic	thermophileⓘ	no	95.50	yes
125438	flagellated	motile2+ⓘ	no	80.00	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66168	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107449
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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