Name: Capnocytophaga felis KC07070
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159062

Type strain:

Species: Capnocytophaga felis

Strain Designation: KC07070

Culture col. no.: DSM 107251, JCM 32681

Strain history: M. Suzuki; Natl. Inst. of Infect. Dis., Japan; KC07070.

NCBI tax ID(s): 2267611 (species)

SI-ID 403751

DSM 107251

Section

Capnocytophaga felis KC07070 is a mesophilic bacterium that was isolated from Oral swab of cat.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Capnocytophaga*
	Species	**Capnocytophaga felis**
	Full Scientific Name (LPSN)	Capnocytophaga felis Suzuki et al. 2020

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.945

[Ref.: #69480]	Motility	no Confidence in %94.28

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65885]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #65885]

Culture medium growth

[Ref.: #65885]

Culture medium link

Medium recipe at MediaDive

[Ref.: #65885]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #65885]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #65885]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65885]	Sample type/isolated from	Oral swab of cat
[Ref.: #65885]	Geographic location (country and/or sea, region)	Tokyo, Kanagawa prefecture
[Ref.: #65885]	Country	Japan
[Ref.: #65885]	Country ISO 3 Code	JPN
[Ref.: #65885]	Continent	Asia
[Ref.: #65885]	Geographic location	35.6528°/139.8390°

[Ref.: #67770]	Sample type/isolated from	Oral cavity of a cat in Tokyo
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Felidae (Cat)
#Infection	#Patient	#Swab
#Host Body-Site	#Oral cavity and airways	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65885]	Capnocytophaga felis KC07070 gene for 16S ribosomal RNA, partial sequence	LC411961	1438	ENA	2267611 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Capnocytophaga felis KC07070	GCA_009684755	scaffold	GenBank	2267611 tax ID
[Ref.: #66792]	Capnocytophaga felis KC07070	2898481861	draft	JGI IMG/M	2267611 tax ID	*

[Ref.: #67770]

GC-content

35.6 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Capnocytophaga felis KC07070 NCBI: GCA_009684755.1
[Ref.: #69481]	spore-forming	no	100	no

Availability in culture collections External links

[Ref.: #65885]

Culture collection no.

DSM 107251, JCM 32681

[Ref.: #111576]

SI-ID 403751

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Capnocytophaga felis sp. nov. isolated from the feline oral cavity.	Suzuki M, Umeda K, Kimura M, Imaoka K, Morikawa S, Maeda K	Int J Syst Evol Microbiol	10.1099/ijsem.0.004176	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65885

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107251

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#111576

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403751.1 )

* These data were automatically processed and therefore are not curated

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