Anaerotignum faecicola (DSM 107953, KCTC 15736, KGMB03357)

Name: Anaerotignum faecicola (DSM 107953, KCTC 15736, KGMB03357)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158907

Type strain

Strain Designation KGMB03357

Culture col. no. DSM 107953 KCTC 15736 KGMB03357

NCBI tax ID(s) 2358141

Special Collections DSMZ KCTC

Links

Anaerotignum faecicola KGMB03357 is an anaerobe, mesophilic, rod-shaped prokaryote that was isolated from human feces.

rod-shaped anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398341

KCTC 15736,DSM 107953

@ref 20215

Last LPSN update 2025-12-16 10:08:08

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Lachnospiraceae

Genus Anaerotignum

Species Anaerotignum faecicola

Full scientific name Anaerotignum faecicola Choi et al. 2020

Morphology

Cell morphology

@ref	Cell shape	Motility
67771	rod-shaped
67771

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
65729	PY + X MEDIUM (DSMZ Medium 104b)		Medium recipe at MediaDive	Name: PY + X MEDIUM (DSMZ Medium 104b) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
65729	positive	growth	37	mesophilic
67771	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
67771	anaerobe
125439	anaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Human
#Host Body Product	#Gastrointestinal tract

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
65729	human feces	Seoul	Republic of Korea	KOR	Asia
67771	From human feces, healthy Korean		Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence MK439508 (>99% sequence identity) for Anaerotignum faecicola subclade from Microbeatlas

Aquatic Samples	2136
Soil Samples	609
Animal Samples	122921
Plant Samples	328
Total Samples	125994

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67771	ASM386503v1 assembly for Anaerotignum faecicola KCTC 15736	contig	GCA_003865035	2358141.3	2843100240	2358141	75.35

Genome browser: GCA_003865035

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
65729	Anaerotignum faecicola 16S ribosomal RNA gene, partial sequence	MK439508	1535		2358141

GC content

@ref	GC-content (mol%)	Method
65729	47.3	sequence analysis
67771	47.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Anaerotignum faecicola KCTC 15736
NCBI: GCA_003865035

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	74.50	no
125439	motility	BacteriaNetⓘ	yes	74.70	no
125439	gram_stain	BacteriaNetⓘ	variable	59.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	99.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Anaerotignum sp. KCTC 15736
PATRIC: 2358141.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	73.83	yes
125438	anaerobic	anaerobicⓘ	yes	82.56	no
125438	spore-forming	spore-formingⓘ	no	58.50	no
125438	aerobic	aerobicⓘ	no	94.05	no
125438	thermophilic	thermophileⓘ	no	93.65	yes
125438	flagellated	motile2+ⓘ	no	89.48	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Anaerotignum faecicola sp. nov., isolated from human faeces.	Choi SH, Kim JS, Park JE, Lee KC, Eom MK, Oh BS, Yu SY, Kang SW, Han KI, Suh MK, Lee DH, Yoon H, Kim BY, Lee JH, Lee JH, Lee JS, Park SH	J Microbiol	10.1007/s12275-019-9268-3	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65729	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107953
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Anaerotignum faecicola (DSM 107953, KCTC 15736, KGMB03357)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003865035

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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