Name: Sulfurimonas crateris DSM 109248
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158906

Type strain:

Species: Sulfurimonas crateris

Culture col. no.: DSM 109248, VKM B-3378, SN 118

Strain history: <- G. B. Slobodkina, Winogradsky Institute of Microbiology, FRC of Fundamentals of Biotechnology RAS, Laboratory of Microbiology of Anthropogenic Habitats; SN118 <- G. B. Slobodkina

NCBI tax ID(s): 2574727 (species)

SI-ID 404875

DSM 109248

Section

Sulfurimonas crateris DSM 109248 is a mesophilic bacterium that was isolated from mud from terrestrial mud volcano.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Epsilonproteobacteria*
	Order	*Campylobacterales*
	Family	*Helicobacteraceae*
	Genus	*Sulfurimonas*
	Species	**Sulfurimonas crateris**
	Full Scientific Name (LPSN)	Sulfurimonas crateris Ratnikova et al. 2020

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65728]

Culture medium

SULFURIMONAS CRATERIS MEDIUM (DSMZ Medium 1699)

[Ref.: #65728]

Culture medium growth

[Ref.: #65728]

Culture medium link

Medium recipe at MediaDive

[Ref.: #65728]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #65728]			growth	30 °C

[Ref.: #65728]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65728]	Sample type/isolated from	mud from terrestrial mud volcano
[Ref.: #65728]	Geographic location (country and/or sea, region)	Taman Peninsula, Krasnodar region, Kuchugur volcano,
[Ref.: #65728]	Country	Russia
[Ref.: #65728]	Country ISO 3 Code	RUS
[Ref.: #65728]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Mud (Sludge)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MK859925 (>99% sequence identity) for Sulfurimonas crateris subclade from Microbeatlas

Aquatic Samples	282
Soil Samples	22
Animal Samples	10
Plant Samples	4
Total Samples	318

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65728]	Sulfurimonas crateris 16S ribosomal RNA gene, partial sequence	MK859925	1466	ENA	2574727 tax ID

[Ref.: #65728]

GC-content

38.8 mol%

sequence analysis

Availability in culture collections External links

[Ref.: #65728]

Culture collection no.

DSM 109248, VKM B-3378, SN 118

[Ref.: #111425]

SI-ID 404875

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sulfurimonas xiamenensis sp. nov. and Sulfurimonas lithotrophica sp. nov., hydrogen- and sulfur-oxidizing chemolithoautotrophs within the Epsilonproteobacteria isolated from coastal sediments, and an emended description of the genus Sulfurimonas.	Wang S, Jiang L, Liu X, Yang S, Shao Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.004087	2020	*
Phylogeny	Sulfurimonas crateris sp. nov., a facultative anaerobic sulfur-oxidizing chemolithoautotrophic bacterium isolated from a terrestrial mud volcano.	Ratnikova NM, Slobodkin AI, Merkel AY, Kopitsyn DS, Kevbrin VV, Bonch-Osmolovskaya EA, Slobodkina GB	Int J Syst Evol Microbiol	10.1099/ijsem.0.003779	2020	*
Phylogeny	Sulfurimonas marina sp. nov., an obligately chemolithoautotrophic, sulphur-oxidizing bacterium isolated from a deep-sea sediment sample from the South China Sea.	Wang Z, Wang S, Lai Q, Wei S, Jiang L, Shao Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.005582	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65728

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 109248

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#111425

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404875.1 )

* These data were automatically processed and therefore are not curated

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