Victivallis lenta (DSM 107290, BBE-744-WT-12, JCM 34375)

Name: Victivallis lenta (DSM 107290, BBE-744-WT-12, JCM 34375)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158898

Type strain

Strain Designation BBE-744-WT-12

Culture col. no. DSM 107290 BBE-744-WT-12 JCM 34375

NCBI tax ID(s) 2606640

Special Collections DSMZ JCM Pig DZIF

History DSMZ <- T. Clavel , TU Munich, Freising-Weihenstephan, Germany; BBE-744-WT-12 JCM <-- B. Abt; DSMZ, Germany; DSM 107290 (=BBE-744-WT-12) <-- T. Clavel; RWTH Aachen, Germany.

Links

Victivallis lenta BBE-744-WT-12 is a bacterium that was isolated from Pig, WT, 4 months old, feces.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 398370

JCM34375,DSM 107290

@ref 20215

Last LPSN update 2026-05-29 08:44:04

Domain Bacteria

Phylum Lentisphaerota

Class Lentisphaeria

Order Victivallales

Family Victivallaceae

Genus Victivallis

Species Victivallis lenta

Full scientific name Victivallis lenta Wylensek et al. 2021

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	91.386
125439	negative	96.852

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
65720	FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)		Medium recipe at MediaDive	Name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a) Composition: Fastidious Anaerobe Basal Broth 35.4 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
65720	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		99.332

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
65720	Pig, WT, 4 months old, feces	Kranzberg (Bavaria)	Germany	DEU	Europe
67770	Feces of an Aachen minipig in Germany

Taxonmaps

69479

Global distribution of 16S sequence MN537533 (>99% sequence identity) for Victivallis from Microbeatlas

Aquatic Samples	728
Soil Samples	126
Animal Samples	16400
Plant Samples	21
Total Samples	17275

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM969554v1 assembly for Victivallis lenta BBE-744-WT-12	contig	GCA_009695545	2606640.5	2936353572	2606640	63.5
66792	Victivallaceae bacterium BBE-744-WT-12	contig		2606640.3		2606640	60.23

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
65720	Victivallis lenta strain BBE-744-WT-12 16S ribosomal RNA gene, partial sequence	MN537533	1471		2652400

GC content

@ref	GC-content (mol%)	Method
67770	59.3	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM969554v1 assembly for Victivallis lenta BBE-744-WT-12
NCBI: GCA_009695545

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	69.56	no
125439	motility	BacteriaNetⓘ	yes	63.97	no
125439	gram_stain	BacteriaNetⓘ	negative	96.85	no
125439	spore_formation	BacteriaNetⓘ	no	99.33	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Victivallaceae bacterium BBE-744-WT-12
PATRIC: 2606640.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	91.39	no
125438	anaerobic	anaerobicⓘ	yes	81.57	no
125438	spore-forming	spore-formingⓘ	no	82.15	no
125438	aerobic	aerobicⓘ	no	88.58	no
125438	thermophilic	thermophileⓘ	no	89.21	yes
125438	flagellated	motile2+ⓘ	no	78.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	A New Reactor Concept for Single-Chamber Microbial Fuel Cells and Possible Anti-Fouling Strategies for Long-Term Operation.	Haupt DR, Landwehr L, Schumann R, Hahn L, Issa M, Coskun C, Kunz U, Sievers M.	Microorganisms	10.3390/microorganisms10122421	2022
Phylogeny	A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity.	Wylensek D, Hitch TCA, Riedel T, Afrizal A, Kumar N, Wortmann E, Liu T, Devendran S, Lesker TR, Hernandez SB, Heine V, Buhl EM, M D'Agostino P, Cumbo F, Fischoder T, Wyschkon M, Looft T, Parreira VR, Abt B, Doden HL, Ly L, Alves JMP, Reichlin M, Flisikowski K, Suarez LN, Neumann AP, Suen G, de Wouters T, Rohn S, Lagkouvardos I, Allen-Vercoe E, Sproer C, Bunk B, Taverne-Thiele AJ, Giesbers M, Wells JM, Neuhaus K, Schnieke A, Cava F, Segata N, Elling L, Strowig T, Ridlon JM, Gulder TAM, Overmann J, Clavel T.	Nat Commun	10.1038/s41467-020-19929-w	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65720	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107290
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Victivallis lenta (DSM 107290, BBE-744-WT-12, JCM 34375)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_009695545

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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