Name: Peptostreptococcus porci WCA-SAB-591-4A-A
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158895

Type strain:

Species: Peptostreptococcus porci

Strain Designation: WCA-SAB-591-4A-A

Culture col. no.: DSM 106284, JCM 34372

Strain history: B. Abt; DSMZ, Germany; DSM 106284 (=WCA-SAB-591-4A-A) <-- T. Clavel; RWTH Aachen, Germany.

NCBI tax ID(s): 2652282 (species)

SI-ID 406392

DSM 106284

Section

Peptostreptococcus porci WCA-SAB-591-4A-A is an anaerobe, mesophilic bacterium that was isolated from feces; pig, 7 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli protein.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Peptostreptococcaceae*
	Genus	*Peptostreptococcus*
	Species	**Peptostreptococcus porci**
	Full Scientific Name (LPSN)	Peptostreptococcus porci Wylensek et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %90.982

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65717]

Culture medium

WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)

[Ref.: #65717]

Culture medium growth

[Ref.: #65717]

Culture medium link

Medium recipe at MediaDive

[Ref.: #65717]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #65717]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #65717]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %100

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.68
[Ref.: #69481]	Ability of spore formation	yes Confidence in %96

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65717]	Sample type/isolated from	feces; pig, 7 month old, genotype: APC1311/+ referring to the adenomatous-polyposis-coli (APC) protein
[Ref.: #65717]	Geographic location (country and/or sea, region)	Kranzberg (Bavaria)
[Ref.: #65717]	Country	Germany
[Ref.: #65717]	Country ISO 3 Code	DEU
[Ref.: #65717]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Feces of a German Landrace pig (minipig breed)
[Ref.: #67770]	Geographic location (country and/or sea, region)	Freising
[Ref.: #67770]	Country	Germany
[Ref.: #67770]	Country ISO 3 Code	DEU
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65717]	Peptostreptococcus sp. DSM 106284 16S ribosomal RNA gene, partial sequence	MN537513	1483	ENA	2652282 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Peptostreptococcus porci WCA-SAB-591-4A-A	GCA_009695815	contig	GenBank	2652282 tax ID	*
[Ref.: #66792]	Peptostreptococcus anaerobius strain WCA-SAB-591-4A-A	1261.56	wgs	PATRIC	1261 tax ID	*

[Ref.: #67770]

GC-content

33.3 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Peptostreptococcus porci WCA-SAB-591-4A-A NCBI: GCA_009695815.1
[Ref.: #69481]	spore-forming	yes	96	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Peptostreptococcus anaerobius strain WCA-SAB-591-4A-A PATRIC: 1261.56
[Ref.: #69480]	motile	no	94.001	no
[Ref.: #69480]	gram-positive	yes	90.359	no
[Ref.: #69480]	anaerobic	yes	99.279	no
[Ref.: #69480]	aerobic	no	98.935	no
[Ref.: #69480]	halophile	no	56.698	no
[Ref.: #69480]	spore-forming	no	71.45	no
[Ref.: #69480]	thermophile	no	95.757	yes
[Ref.: #69480]	glucose-util	yes	88.556	no
[Ref.: #69480]	flagellated	no	96.908	no
[Ref.: #69480]	glucose-ferment	yes	69.666	no

Availability in culture collections External links

[Ref.: #65717]

Culture collection no.

DSM 106284, JCM 34372

[Ref.: #111414]

SI-ID 406392

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65717

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 106284

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#111414

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406392.1 )

* These data were automatically processed and therefore are not curated

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Peptostreptococcus porci WCA-SAB-591-4A-A

Peptostreptococcus anaerobius strain WCA-SAB-591-4A-A

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