Name: Paraburkholderia caseinilytica HM451
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158824

Type strain:

Species: Paraburkholderia caseinilytica

Strain Designation: HM451

Culture col. no.: GDMCC 1.1190, LMG 30092

NCBI tax ID(s): 2171978 (species)

Special Collections

Literature strains

Section

When using BacDive for research please cite our paper

Paraburkholderia caseinilytica HM451 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from forest soil .

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Burkholderiaceae*
	Genus	*Paraburkholderia*
	Species	**Paraburkholderia caseinilytica**
	Full Scientific Name (LPSN)	Paraburkholderia caseinilytica Gao et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #65588]	Gram stain	negative

[Ref.: #65588]	Cell length	1.0-2.1 µm

[Ref.: #65588]	Cell width	0.4-0.8 µm

[Ref.: #65588]	Cell shape	rod-shaped

[Ref.: #65588]	Colony color	white
[Ref.: #65588]	Colony shape	circular
[Ref.: #65588]	Incubation period	2 days
[Ref.: #65588]	Cultivation medium used	R2A

Information on culture and growth conditions Culture and growth conditions

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Culture medium

Trypticase Soy Agar (TSA)

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Culture medium growth

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Culture medium

LB (Luria-Bertani) MEDIUM

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Culture medium growth

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Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

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Culture medium

MacConkey

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #65588]			growth	4-42 °C
[Ref.: #65588]			optimum	28 °C

	pH	Kind of pH		pH
[Ref.: #65588]			optimum	5.0-6.0
[Ref.: #65588]			growth	4.5-9.0

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #65588]		NaCl		growth	0-4.5	%(w/v)
[Ref.: #65588]		NaCl		optimum	0-2.5	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65588]	adipate ChEBI	+	carbon source
[Ref.: #65588]	adipate ChEBI	+	growth
[Ref.: #65588]	cellobiose ChEBI	+	carbon source
[Ref.: #65588]	cellobiose ChEBI	+	growth
[Ref.: #65588]	D-arabinose ChEBI	-	assimilation
[Ref.: #65588]	D-arabitol ChEBI	+	carbon source
[Ref.: #65588]	D-arabitol ChEBI	+	growth
[Ref.: #65588]	D-fructose ChEBI	+	carbon source
[Ref.: #65588]	D-fructose ChEBI	+	growth
[Ref.: #65588]	D-fucose ChEBI	-	assimilation
[Ref.: #65588]	D-galactose ChEBI	+	carbon source
[Ref.: #65588]	D-galactose ChEBI	+	growth
[Ref.: #65588]	D-lyxose ChEBI	+	carbon source
[Ref.: #65588]	D-lyxose ChEBI	+	growth
[Ref.: #65588]	D-mannitol ChEBI	+	carbon source
[Ref.: #65588]	D-mannitol ChEBI	+	growth
[Ref.: #65588]	D-mannose ChEBI	+	carbon source
[Ref.: #65588]	D-mannose ChEBI	+	growth
[Ref.: #65588]	D-ribose ChEBI	+	carbon source
[Ref.: #65588]	D-ribose ChEBI	+	growth
[Ref.: #65588]	D-sorbitol ChEBI	+	carbon source
[Ref.: #65588]	D-sorbitol ChEBI	+	growth
[Ref.: #65588]	D-xylose ChEBI	+	carbon source
[Ref.: #65588]	D-xylose ChEBI	+	growth
[Ref.: #65588]	decanoate ChEBI	+	carbon source
[Ref.: #65588]	decanoate ChEBI	+	growth
[Ref.: #65588]	erythritol ChEBI	-	assimilation
[Ref.: #65588]	esculin ferric citrate	+	carbon source
[Ref.: #65588]	esculin ferric citrate	+	growth
[Ref.: #65588]	gentiobiose ChEBI	+	carbon source
[Ref.: #65588]	gentiobiose ChEBI	+	growth
[Ref.: #65588]	glucose ChEBI	+	carbon source
[Ref.: #65588]	glucose ChEBI	+	fermentation
[Ref.: #65588]	glucose ChEBI	+	growth
[Ref.: #65588]	glycogen ChEBI	+	carbon source
[Ref.: #65588]	glycogen ChEBI	+	growth
[Ref.: #65588]	inulin ChEBI	+	carbon source
[Ref.: #65588]	inulin ChEBI	+	growth
[Ref.: #65588]	L-arabinose ChEBI	+	carbon source
[Ref.: #65588]	L-arabinose ChEBI	+	growth
[Ref.: #65588]	L-arabitol ChEBI	-	assimilation
[Ref.: #65588]	L-fucose ChEBI	+	carbon source
[Ref.: #65588]	L-fucose ChEBI	+	growth
[Ref.: #65588]	L-rhamnose ChEBI	+	carbon source
[Ref.: #65588]	L-rhamnose ChEBI	+	growth
[Ref.: #65588]	L-xylose ChEBI	+	carbon source
[Ref.: #65588]	L-xylose ChEBI	+	growth
[Ref.: #65588]	malate ChEBI	+	carbon source
[Ref.: #65588]	malate ChEBI	+	growth
[Ref.: #65588]	maltose ChEBI	-	assimilation
[Ref.: #65588]	melibiose ChEBI	-	assimilation
[Ref.: #65588]	myo-inositol ChEBI	+	carbon source
[Ref.: #65588]	myo-inositol ChEBI	+	growth
[Ref.: #65588]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #65588]	N-acetylglucosamine ChEBI	+	growth
[Ref.: #65588]	phenylacetate ChEBI	+	carbon source
[Ref.: #65588]	phenylacetate ChEBI	+	growth
[Ref.: #65588]	potassium 2-dehydro-D-gluconate	+	carbon source
[Ref.: #65588]	potassium 2-dehydro-D-gluconate	+	growth
[Ref.: #65588]	potassium gluconate ChEBI	+	carbon source
[Ref.: #65588]	potassium gluconate ChEBI	+	growth
[Ref.: #65588]	raffinose ChEBI	-	assimilation
[Ref.: #65588]	ribitol ChEBI	-	assimilation
[Ref.: #65588]	sodium citrate ChEBI	-	assimilation
[Ref.: #65588]	sucrose ChEBI	-	assimilation
[Ref.: #65588]	turanose ChEBI	-	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #65588]	acid phosphatase	+	3.1.3.2
[Ref.: #65588]	alkaline phosphatase	+	3.1.3.1
[Ref.: #65588]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #65588]	alpha-fucosidase	-	3.2.1.51
[Ref.: #65588]	alpha-galactosidase	-	3.2.1.22
[Ref.: #65588]	alpha-glucosidase	-	3.2.1.20
[Ref.: #65588]	alpha-mannosidase	-	3.2.1.24
[Ref.: #65588]	arginine dihydrolase	+	3.5.3.6
[Ref.: #65588]	beta-galactosidase	-	3.2.1.23
[Ref.: #65588]	beta-glucosidase	+	3.2.1.21
[Ref.: #65588]	beta-glucuronidase	-	3.2.1.31
[Ref.: #65588]	cystine arylamidase	+	3.4.11.3
[Ref.: #65588]	esterase (C 4)	+
[Ref.: #65588]	esterase Lipase (C 8)	+
[Ref.: #65588]	gelatinase	-
[Ref.: #65588]	leucine arylamidase	+	3.4.11.1
[Ref.: #65588]	lipase (C 14)	-
[Ref.: #65588]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #65588]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #65588]	trypsin	-	3.4.21.4
[Ref.: #65588]	urease	+	3.5.1.5
[Ref.: #65588]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65588]	Sample type/isolated from	forest soil (acidic)
[Ref.: #65588]	Geographic location (country and/or sea, region)	Dinghushan Biosphere Reserve, Guangdong Province
[Ref.: #65588]	Country	China
[Ref.: #65588]	Country ISO 3 Code	CHN
[Ref.: #65588]	Continent	Asia
[Ref.: #65588]	Geographic location	23.1667°/112.5170°
[Ref.: #65588]	Enrichment culture	R2A
[Ref.: #65588]	Enrichment culture duration	5 days
[Ref.: #65588]	Enrichment culture temperature	28 ̊C
[Ref.: #65588]	Isolation/enrichment procedure	10 g soil sample was suspended in 100 ml saline (0.85 % NaCl) and serially diluted
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil
#Condition	#Acidic	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65588]	Paraburkholderia caseinilytica strain HM451 16S ribosomal RNA gene, partial sequence	MF950896		GenBank ENA

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GC-content

65.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

GDMCC 1.1190, LMG 30092

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paraburkholderia caseinilytica sp. nov., isolated from the pine and broad-leaf mixed forest soil.	Gao ZH, Zhong SF, Lu ZE, Xiao SY, Qiu LH	Int J Syst Evol Microbiol	10.1099/ijsem.0.002774	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65588

Zeng-hong Gao, Shu-fen Zhong, Zu-er Lu, Sen-yang Xiao and Li-hong Qiu: Paraburkholderia caseinilytica sp. nov., isolated from the pine and broad-leaf mixed forest soil. IJSEM 68: 1963 - 1968 2018 ( DOI 10.1099/ijsem.0.002774 , PubMed 29676723 )

* These data were automatically processed and therefore are not curated

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