Streptomyces fuscigenes (KACC 18269, NBRC 110629, JBL-20)

Name: Streptomyces fuscigenes (KACC 18269, NBRC 110629, JBL-20)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158796

Type strain

Strain Designation JBL-20

Culture col. no. KACC 18269 NBRC 110629 JBL-20

NCBI tax ID(s) 1528880

Special Collections Literature strains

Links

Streptomyces fuscigenes JBL-20 is an aerobe, spore-forming, Gram-positive prokaryote that builds an aerial mycelium and was isolated from bamboo litter.

spore-forming Gram-positive aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 393396

NBRC 110629

@ref 20215

Last LPSN update 2026-02-09 11:38:25

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces fuscigenes

Full scientific name Streptomyces fuscigenes Lee and Whang 2018

Morphology

Cell morphology

@ref	Gram stain	Motility	Confidence
65556	positive
125438			90.094

Multicellular morphology

@ref	Forms multicellular complex	Complex name	Complex color	Medium name
65556		aerial mycelium	white to dark grey	ISP 2 - ISP 5
65556		substrate mycelium	ivory to black

Culture and growth conditions

Culture medium

@ref	Name	Growth
65556	ISP 2
65556	ISP 3
65556	ISP 4
65556	ISP 5
65556	ISP 6
65556	ISP 7
65556	Bennett's agar

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
65556	positive	growth	4-30
65556	positive	optimum	28	mesophilic
65556	negative	growth	35-45

Culture pH

@ref	Ability	Type	PH	PH range
65556	positive	optimum	7.0-8.0
65556	positive	growth	4.0-10.0	alkaliphile
65556		growth	11.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
65556	aerobe
125438	aerobe	90.336

Spore formation

@ref	Spore formation	Confidence
65556
125438		91.965

Halophily

@ref	Salt	Growth	Tested relation	Concentration
65556	NaCl	positive	growth	0-3 %(w/v)
65556	NaCl		growth	4-7 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
65556		casein	+	hydrolysis
65556	62968 ChEBI	cellulose	+	hydrolysis
65556	15824 ChEBI	D-fructose	+	carbon source
65556	17634 ChEBI	D-glucose	+	carbon source
65556	16899 ChEBI	D-mannitol	+	carbon source
65556	63150 ChEBI	D-rhamnose	-	carbon source
65556	65327 ChEBI	D-xylose	-	carbon source
65556	5291 ChEBI	gelatin	-	hydrolysis
65556	17632 ChEBI	nitrate	+	reduction
65556	16634 ChEBI	raffinose	-	carbon source
65556	28017 ChEBI	starch	-	hydrolysis
65556	17992 ChEBI	sucrose	-	carbon source
65556	16199 ChEBI	urea	+	hydrolysis

Fatty acid profile

Metadata FA analysis

@ref

65556

Fatty acid	Percentage
C15:0 iso	23.3
C15:0 anteiso	15.5
C14:0 iso	14.8
C18:1ω7c	14.7
C16:0 iso	12.5
C16:0	4
C17:0 iso	2.2
C14:0	1.6
C15:0	1.4
C17:1 anteiso ω9c	1.3
C17:0 anteiso	1.3

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Plant	#Plant litter (Forest)
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture composition	Enrichment culture duration	Enrichment culture temperature
65556	bamboo (Sasa borealis) litter	Damyang, Jeonnam	Republic of Korea	KOR	Asia	Bennett's agar	supplemented with cycloheximide (50 µg/ml) and nalidixic acid (20 µg/ml) at pH 5.5	14 days	28

Taxonmaps

69479

Global distribution of 16S sequence AB980255 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	4
Soil Samples	39
Animal Samples	7
Plant Samples	4
Total Samples	54

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID
66792	ASM2155645v1 assembly for Streptomyces fuscigenes JBL-20	contig	GCA_021556455	1528880.3	8054568970	1528880

16S sequences

@ref	Description	Accession	Database
65556	Streptomyces fuscigenes JBL-20 gene for 16S ribosomal RNA, partial sequence	AB980255

GC content

@ref	GC-content (mol%)	Method
65556	72.4	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces fuscigenes JBL-20
NCBI: GCA_021556455.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.75	yes
125438	anaerobic	anaerobicⓘ	no	98.56	yes
125438	aerobic	aerobicⓘ	yes	90.34	yes
125438	spore-forming	spore-formingⓘ	yes	91.97	yes
125438	thermophilic	thermophileⓘ	no	97.49	yes
125438	flagellated	motile2+ⓘ	no	90.09	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces montanisoli sp. nov., exhibiting antimicrobial activity, isolated from mountain soil around a decaying tree.	Lee JH, Jeong JW, Lee DH, Kim SB	Int J Syst Evol Microbiol	10.1099/ijsem.0.005315	2022
Phylogeny	Streptomyces fuscigenes sp. nov., isolated from bamboo (Sasa borealis) litter.	Lee HJ, Whang KS	Int J Syst Evol Microbiol	10.1099/ijsem.0.002706	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65556	Hyo-Jin Lee and Kyung-Sook Whang: Streptomyces fuscigenes sp. nov., isolated from bamboo (Sasa borealis) litter. IJSEM 68: 1541 - 1545 2018 ( DOI 10.1099/ijsem.0.002706 , PubMed 29537363 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces fuscigenes (KACC 18269, NBRC 110629, JBL-20)

Name and taxonomic classification