Castellaniella fermenti CC-YTH191 is an aerobe, Gram-negative prokaryote that forms circular colonies and was isolated from fermented meal.
Gram-negative colony-forming aerobe 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Burkholderiales |
| Family Alcaligenaceae |
| Genus Castellaniella |
| Species Castellaniella fermenti |
| Full scientific name Castellaniella fermenti Lin et al. 2018 |
| 65511 | Oxygen toleranceaerobe |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 65511 | 64552 ChEBI | 2-hydroxybutyrate | + | oxidation | |
| 65511 | 28644 ChEBI | 2-oxopentanoate | + | oxidation | |
| 65511 | 37054 ChEBI | 3-hydroxybutyrate | + | oxidation | |
| 65511 | 16724 ChEBI | 4-hydroxybutyrate | + | oxidation | |
| 65511 | 18101 ChEBI | 4-hydroxyphenylacetic acid | + | oxidation | |
| 65511 | 30089 ChEBI | acetate | + | oxidation | |
| 65511 | 73706 ChEBI | bromosuccinate | + | oxidation | |
| 65511 | 15570 ChEBI | D-alanine | + | oxidation | |
| 65511 | 16865 ChEBI | gamma-aminobutyric acid | + | oxidation | |
| 65511 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 65511 | 73784 ChEBI | glycyl-l-glutamate | + | oxidation | |
| 65511 | 24741 ChEBI | hydroxyproline | + | oxidation | |
| 65511 | 16977 ChEBI | L-alanine | + | oxidation | |
| 65511 | 73786 ChEBI | L-alanylglycine | + | oxidation | |
| 65511 | 17196 ChEBI | L-asparagine | + | oxidation | |
| 65511 | 29985 ChEBI | L-glutamate | + | oxidation | |
| 65511 | 15603 ChEBI | L-leucine | + | oxidation | |
| 65511 | 17203 ChEBI | L-proline | + | oxidation | |
| 65511 | 18183 ChEBI | L-pyroglutamic acid | + | oxidation | |
| 65511 | 17115 ChEBI | L-serine | + | oxidation | |
| 65511 | 16857 ChEBI | L-threonine | + | oxidation | |
| 65511 | 24996 ChEBI | lactate | + | oxidation | |
| 65511 | 25115 ChEBI | malate | + | assimilation | |
| 65511 | 51850 ChEBI | methyl pyruvate | + | oxidation | |
| 65511 | 75146 ChEBI | monomethyl succinate | + | oxidation | |
| 65511 | 17632 ChEBI | nitrate | + | reduction | |
| 65511 | 17272 ChEBI | propionate | + | oxidation | |
| 65511 | 28017 ChEBI | starch | - | hydrolysis | |
| 65511 | 143136 ChEBI | succinamate | + | oxidation | |
| 65511 | 30031 ChEBI | succinate | + | oxidation | |
| 65511 | 53424 ChEBI | tween 20 | - | hydrolysis | |
| 65511 | 53423 ChEBI | tween 40 | - | hydrolysis | |
| 65511 | 53425 ChEBI | tween 60 | - | hydrolysis | |
| 65511 | 53426 ChEBI | tween 80 | - | hydrolysis |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 65511 | acid phosphatase | + | 3.1.3.2 | |
| 65511 | alkaline phosphatase | + | 3.1.3.1 | |
| 65511 | alpha-fucosidase | + | 3.2.1.51 | |
| 65511 | catalase | + | 1.11.1.6 | |
| 65511 | cystine arylamidase | + | 3.4.11.3 | |
| 65511 | cytochrome oxidase | + | 1.9.3.1 | |
| 65511 | DNase | - | ||
| 65511 | esterase (C 4) | + | ||
| 65511 | esterase Lipase (C 8) | + | ||
| 65511 | leucine arylamidase | + | 3.4.11.1 | |
| 65511 | naphthol-AS-BI-phosphohydrolase | + | ||
| 65511 | trypsin | + | 3.4.21.4 | |
| 65511 | valine arylamidase | + |
| Metadata FA analysis | |||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||
| incubation medium | TSA | ||||||||||||||||||||||||
| incubation temperature | 30 | ||||||||||||||||||||||||
| incubation time | 2 | ||||||||||||||||||||||||
| library/peak naming table | RTSBA6 | ||||||||||||||||||||||||
| system | MIS MIDI | ||||||||||||||||||||||||
| method/protocol | Sasser, 1990 | ||||||||||||||||||||||||
| @ref | 65511 | ||||||||||||||||||||||||
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| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Castellaniella fermenti sp. nov., isolated from a fermented meal. | Lin SY, Hameed A, Hsieh YT, Hsu YH, Lai WA, Young CC | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002436 | 2017 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #65511 | Shih-Yao Lin, Asif Hameed, Yu-Ting Hsieh, Yi-Han Hsu, Wei-An Lai and Chiu-Chung Young: Castellaniella fermenti sp. nov., isolated from a fermented meal. IJSEM 68: 52 - 57 2018 ( DOI 10.1099/ijsem.0.002436 , PubMed 29116034 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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