Sulfitobacter aestuarii (KCTC 32982, TISTR 2562, hydD52)

Name: Sulfitobacter aestuarii (KCTC 32982, TISTR 2562, hydD52)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158728

Type strain

Strain Designation hydD52

Culture col. no. KCTC 32982 TISTR 2562 hydD52

NCBI tax ID(s) 2161676

Special Collections KCTC Literature strains

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Sulfitobacter aestuarii hydD52 is an aerobe, mesophilic, Gram-negative prokaryote that forms circular colonies and was isolated from a sample of tidal flat sediment.

Gram-negative motile rod-shaped colony-forming aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 285963

KCTC 32982

@ref 20215

Last LPSN update 2025-12-16 10:08:05

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Roseobacteraceae

Genus Sulfitobacter

Species Sulfitobacter aestuarii

Full scientific name Sulfitobacter aestuarii Park et al. 2018

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell shape	Motility
65478	negative	1-1.5 µm	rod-shaped

Colony morphology

@ref	Colony color	Colony shape	Medium used
65478	whitish	circular	marine agar

Culture and growth conditions

Culture medium

@ref	Name	Growth
65478	Marine agar (MA)

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
65478				mesophilic
65478	positive	growth	10-37
65478	positive	optimum	30	mesophilic
67771	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
65478	positive	optimum	7
65478	positive	growth	6-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
65478	aerobe
67771	aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
65478	NaCl	positive	growth	1-12 %(w/v)

Observation

65478

Observationrequires Na+ for growth

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
65478	16651 ChEBI	(S)-lactate	+	assimilation
65478	30089 ChEBI	acetate	+	carbon source
65478	13705 ChEBI	acetoacetate	+	carbon source
65478	73706 ChEBI	bromosuccinate	-	assimilation
65478	17057 ChEBI	cellobiose	-	assimilation
65478	16947 ChEBI	citrate	+	assimilation
65478	18333 ChEBI	D-arabitol	+	assimilation
65478	29990 ChEBI	D-aspartate	+	assimilation
65478	15824 ChEBI	D-fructose	+	assimilation
65478	78697 ChEBI	D-fructose 6-phosphate	+	assimilation
65478	28847 ChEBI	D-fucose	+	assimilation
65478	12931 ChEBI	D-galactonate	+	assimilation
65478	8391 ChEBI	D-gluconate	+	assimilation
65478	14314 ChEBI	D-glucose 6-phosphate	+	assimilation
65478	15748 ChEBI	D-glucuronate	+	assimilation
65478	15588 ChEBI	D-malate	+	assimilation
65478	16899 ChEBI	D-mannitol	+	carbon source
65478	33801 ChEBI	D-saccharate	+	assimilation
65478	15740 ChEBI	formate	+	assimilation
65478	16537 ChEBI	galactarate	+	assimilation
65478	16865 ChEBI	gamma-aminobutyric acid	+	assimilation
65478	495056 ChEBI	gamma-cyclodextrin	+	assimilation
65478	32323 ChEBI	glucuronamide	+	assimilation
65478	17754 ChEBI	glycerol	+	assimilation
65478	70744 ChEBI	glycine-proline	+	carbon source
65478	17596 ChEBI	inosine	+	assimilation
65478	16977 ChEBI	L-alanine	+	carbon source
65478	16467 ChEBI	L-arginine	+	carbon source
65478	18287 ChEBI	L-fucose	+	assimilation
65478	29985 ChEBI	L-glutamate	+	carbon source
65478	15971 ChEBI	L-histidine	+	carbon source
65478	15589 ChEBI	L-malate	+	assimilation
65478	18183 ChEBI	L-pyroglutamic acid	+	assimilation
65478	17115 ChEBI	L-serine	+	carbon source
65478	63153 ChEBI	N-acetyl-D-mannosamine	+	assimilation
65478	28037 ChEBI	N-acetylgalactosamine	+	assimilation
65478	506227 ChEBI	N-acetylglucosamine	-	assimilation
65478	35418 ChEBI	n-acetylneuraminate	-	assimilation
65478	17272 ChEBI	propionate	+	carbon source
65478	26490 ChEBI	quinate	+	assimilation
65478	32528 ChEBI	turanose	+	assimilation
65478	53423 ChEBI	tween 40	+	carbon source

Enzymes

@ref	Value	Activity	Ec
65478	acid phosphatase	-	3.1.3.2
65478	alkaline phosphatase	-	3.1.3.1
65478	alpha-chymotrypsin	-	3.4.21.1
65478	alpha-fucosidase	-	3.2.1.51
65478	alpha-galactosidase	-	3.2.1.22
65478	alpha-glucosidase	-	3.2.1.20
65478	alpha-mannosidase	-	3.2.1.24
65478	beta-galactosidase	-	3.2.1.23
65478	beta-glucuronidase	-	3.2.1.31
65478	catalase	+	1.11.1.6
65478	cytochrome oxidase	+	1.9.3.1
65478	esterase (C 4)	+
65478	esterase Lipase (C 8)	+
65478	leucine arylamidase	+	3.4.11.1
65478	lipase (C 14)	+
65478	N-acetyl-beta-glucosaminidase	-	3.2.1.52
65478	naphthol-AS-BI-phosphohydrolase	+
65478	trypsin	-	3.4.21.4
65478	tryptophan deaminase	+	4.1.99.1
65478	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

@ref

65478

Fatty acid	Percentage
C18:1ω7c or C18:1ω6c	66.8
C16:0	10.8
C18:1ω7c 11-methyl	8.6
C19:0 cycloω8c	6.6
C10:0 3OH	2.2
C16:1ω7c or C16:1ω6c	2
C18:0	1.4
C17:0	0.7
C12:0 3OH	0.6
C17:1ω8c	0.3

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Sediment
#Environmental	#Terrestrial	#Tidal flat

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture duration	Enrichment culture temperature	Isolation procedure
65478	a sample of tidal flat sediment	Yellow Sea	Republic of Korea	KOR	Asia	solid mineral salt medium	1 week	25	isolated from a serially diluted seawater suspension of tidal flat sediment from the Yellow Sea, as previously reported
67771	From Gaetbol (Tidal flat at Asan Bay)		Republic of Korea	KOR	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4268500v1 assembly for Sulfitobacter aestuarii TISTR 2562	scaffold	GCA_042685005	2161676	47.26

16S sequences

@ref	Description	Accession	Database
65478	Sulfitobacter aestuarii strain hydD52 16S ribosomal RNA gene, partial sequence	MG210570

GC content

@ref	GC-content (mol%)	Method
65478	64	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sulfitobacter algicola sp. nov., isolated from green algae.	Wang CN, Liu Y, Wang J, Du ZJ, Wang MY	Arch Microbiol	10.1007/s00203-021-02213-w	2021
Phylogeny	Sulfitobacter aestuarii sp. nov., a marine bacterium isolated from a tidal flat of the Yellow Sea.	Park AY, Teeravet S, Pheng S, Lee JR, Kim SG, Suwannachart C	Int J Syst Evol Microbiol	10.1099/ijsem.0.002747	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65478	A-Young Park, Siritorn Teeravet, Sophea Pheng, Jong Rok Lee, Song-Gun Kim, Chatrudee Suwannachart: Sulfitobacter aestuarii sp. nov., a marine bacterium isolated from a tidal flat of the Yellow Sea. IJSEM 68: 1771 - 1775 2018 ( DOI 10.1099/ijsem.0.002747 , PubMed 29620497 )
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sulfitobacter aestuarii (KCTC 32982, TISTR 2562, hydD52)

Name and taxonomic classification