Name: Altererythrobacter fulvus S-54
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158660

Type strain:

Species: Altererythrobacter fulvus

Strain Designation: S-54

Culture col. no.: KEMB 9005-542, KACC 19119, NBRC 112676

NCBI tax ID(s): 2126012 (species)

Section

Altererythrobacter fulvus S-54 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from forest topsoil.

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Erythrobacteraceae*
	Genus	*Altererythrobacter*
	Species	**Altererythrobacter fulvus**
	Full Scientific Name (LPSN)	Altererythrobacter fulvus Dahal and Kim 2018

Information on morphological and physiological properties Morphology

[Ref.: #65387]	Gram stain	negative

[Ref.: #65387]	Cell length	0.98-1-22 µm

[Ref.: #65387]	Cell width	0.45-0.65 µm

[Ref.: #65387]	Cell shape	rod-shaped

[Ref.: #65387]	Motility	no

[Ref.: #65387]	Colony size	2-3 mm
[Ref.: #65387]	Colony color	yellow
[Ref.: #65387]	Colony shape	circular
[Ref.: #65387]	Incubation period	4 days
[Ref.: #65387]	Cultivation medium used	tryptic soy agar

[Ref.: #65387]	Pigment production	no
[Ref.: #65387]	Pigment name	flexirubin-type pigments
[Ref.: #65387]	Pigment production	yes
[Ref.: #65387]	Pigment name	carotinoid pigments

Information on culture and growth conditions Culture and growth conditions

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Culture medium

tryptic soy agar

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Culture medium growth

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Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

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Culture medium

Nutrient agar (NA)

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Culture medium growth

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Culture medium

LB (Luria-Bertani) MEDIUM

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Culture medium growth

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Culture medium

veal infusion agar

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Culture medium growth

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Culture medium

brain-heart infusion agar

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Culture medium growth

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Culture medium

Mueller Hinton agar

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Culture medium growth

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Culture medium

Marine agar (MA)

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Culture medium growth

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Culture medium

Czapek-Dox agar

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Culture medium growth

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Culture medium

sorbitol MacConkey agar

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #65387]			growth	15-45 °C
[Ref.: #65387]			optimum	20-35 °C

	pH	Kind of pH		pH
[Ref.: #65387]			optimum	6.5-9.5
[Ref.: #65387]			growth	5.5-10.5

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #65387]		NaCl		optimum	0	%
[Ref.: #65387]		NaCl		growth	0-4	%

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Observation

Hydrogen sulphide is not produced from culture in SIM medium and anaerobic growth is not observed.

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65387]	3-hydroxybutyrate ChEBI	-	assimilation
[Ref.: #65387]	4-hydroxybenzoate ChEBI	+	carbon source
[Ref.: #65387]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #65387]	casein	-	hydrolysis
[Ref.: #65387]	chitin ChEBI	-	hydrolysis
[Ref.: #65387]	D-glucose ChEBI	-	assimilation
[Ref.: #65387]	D-glucose ChEBI	+	carbon source
[Ref.: #65387]	D-mannitol ChEBI	-	assimilation
[Ref.: #65387]	decanoate ChEBI	-	assimilation
[Ref.: #65387]	dna ChEBI	-	hydrolysis
[Ref.: #65387]	esculin ChEBI	+	hydrolysis
[Ref.: #65387]	gelatin ChEBI	-	hydrolysis
[Ref.: #65387]	glucose ChEBI	-	builds acid from
[Ref.: #65387]	glucose ChEBI	-	fermentation
[Ref.: #65387]	glycogen ChEBI	-	assimilation
[Ref.: #65387]	hypoxanthine ChEBI	-	hydrolysis
[Ref.: #65387]	L-arabinose ChEBI	-	assimilation
[Ref.: #65387]	lactate ChEBI	+	carbon source
[Ref.: #65387]	malate ChEBI	-	assimilation
[Ref.: #65387]	maltose ChEBI	-	assimilation
[Ref.: #65387]	maltose ChEBI	-	builds acid from
[Ref.: #65387]	nitrate ChEBI	-	reduction
[Ref.: #65387]	potassium gluconate ChEBI	-	assimilation
[Ref.: #65387]	propionate ChEBI	-	assimilation
[Ref.: #65387]	sodium acetate ChEBI	-	assimilation
[Ref.: #65387]	sodium citrate ChEBI	-	assimilation
[Ref.: #65387]	starch ChEBI	-	hydrolysis
[Ref.: #65387]	suberic acid ChEBI	-	assimilation
[Ref.: #65387]	sucrose ChEBI	-	builds acid from
[Ref.: #65387]	trehalose ChEBI	-	builds acid from
[Ref.: #65387]	tryptophan ChEBI	-	energy source
[Ref.: #65387]	tween 40 ChEBI	-	hydrolysis
[Ref.: #65387]	tween 60 ChEBI	-	hydrolysis
[Ref.: #65387]	tween 80 ChEBI	-	hydrolysis
[Ref.: #65387]	tyrosine ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #65387]		indole ChEBI	no

	Physiological tests	Metabolite	Indole test
[Ref.: #65387]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #65387]	acid phosphatase	+	3.1.3.2
[Ref.: #65387]	alkaline phosphatase	+	3.1.3.1
[Ref.: #65387]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #65387]	alpha-fucosidase	-	3.2.1.51
[Ref.: #65387]	alpha-galactosidase	-	3.2.1.22
[Ref.: #65387]	alpha-glucosidase	+	3.2.1.20
[Ref.: #65387]	alpha-mannosidase	-	3.2.1.24
[Ref.: #65387]	beta-galactosidase	+	3.2.1.23
[Ref.: #65387]	beta-glucosidase	+	3.2.1.21
[Ref.: #65387]	beta-glucuronidase	-	3.2.1.31
[Ref.: #65387]	catalase	+	1.11.1.6
[Ref.: #65387]	cystine arylamidase	+	3.4.11.3
[Ref.: #65387]	cytochrome oxidase	+	1.9.3.1
[Ref.: #65387]	esterase (C 4)	+
[Ref.: #65387]	esterase Lipase (C 8)	+
[Ref.: #65387]	leucine arylamidase	+	3.4.11.1
[Ref.: #65387]	lipase (C 14)	-
[Ref.: #65387]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #65387]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #65387]	trypsin	+	3.4.21.4
[Ref.: #65387]	tryptophan deaminase	-	4.1.99.1
[Ref.: #65387]	urease	-	3.5.1.5
[Ref.: #65387]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65387]	Sample type/isolated from	forest topsoil
[Ref.: #65387]	Geographic location (country and/or sea, region)	Kyonggi University, Suwon
[Ref.: #65387]	Country	Republic of Korea
[Ref.: #65387]	Country ISO 3 Code	KOR
[Ref.: #65387]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KY117470 (>99% sequence identity) for Erythrobacteraceae from Microbeatlas

Aquatic Samples	64
Soil Samples	152
Animal Samples	36
Plant Samples	20
Total Samples	272

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65387]	16S rRNA gene sequence	KY117470		GenBank

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GC-content

64.2 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

KEMB 9005-542, KACC 19119, NBRC 112676

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Altererythrobacter fulvus sp. nov., a novel alkalitolerant alphaproteobacterium isolated from forest soil.	Dahal RH, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.002697	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65387

Ram Hari Dahal, Jaisoo Kim: Altererythrobacter fulvus sp. nov., a novel alkalitolerant alphaproteobacterium isolated from forest soil. IJSEM 68: 1502 - 1508 2018 ( DOI 10.1099/ijsem.0.002697 , PubMed 29537360 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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