Ferrovibrio soli (KEMB 9005-522, KACC 19102, NBRC 112682)

Name: Ferrovibrio soli (KEMB 9005-522, KACC 19102, NBRC 112682)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158602

Type strain

Strain Designation A15

Culture col. no. KEMB 9005-522 KACC 19102 NBRC 112682 A15

NCBI tax ID(s) 2059212

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Ferrovibrio soli A15 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from stream bank soil.

Gram-negative motile rod-shaped colony-forming aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 393597

NBRC 112682

@ref 20215

Last LPSN update 2026-02-09 11:38:22

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sneathiellales

Family Sneathiellaceae

Genus Ferrovibrio

Species Ferrovibrio soli

Full scientific name Ferrovibrio soli Dahal and Kim 2018

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Flagellum arrangement
65318	negative	rod-shaped		monotrichous, polar

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
65318	1-2 mm	cream	circular	4 days	R2A

Culture and growth conditions

Culture medium

@ref	Name	Growth
65318	Reasoner's 2A agar (R2A)
65318	tryptic soy agar
65318	veal infusion agar
65318	Nutrient agar (NA)
65318	LB (Luria-Bertani) MEDIUM
65318	Mueller-Hinton agar
65318	Marine agar (MA)
65318	Brain-Heart infuison agar
65318	MacConkey agar

Culture temp

@ref	Growth	Type	Temperature (°C)
65318	positive	growth	20-42
65318	positive	optimum	28-32

Culture pH

@ref	Ability	Type	PH	PH range
65318	positive	optimum	7-8
65318	positive	growth	5.5-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

65318

Oxygen toleranceaerobe

Spore formation

65318

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
65318	NaCl	positive	growth	0-1.5 %
65318	NaCl	positive	optimum	0 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
65318	37054 ChEBI	3-hydroxybutyrate	+	assimilation
65318	85146 ChEBI	carboxymethylcellulose	+	hydrolysis
65318		casein	-	hydrolysis
65318	17029 ChEBI	chitin	-	hydrolysis
65318	16991 ChEBI	dna	-	hydrolysis
65318	5291 ChEBI	gelatin	-	hydrolysis
65318	17234 ChEBI	glucose	-	fermentation
65318	17368 ChEBI	hypoxanthine	-	hydrolysis
65318	16977 ChEBI	L-alanine	+	assimilation
65318	15971 ChEBI	L-histidine	+	assimilation
65318	17203 ChEBI	L-proline	+	assimilation
65318	24996 ChEBI	lactate	+	assimilation
65318	25115 ChEBI	malate	+	assimilation
65318	17632 ChEBI	nitrate	-	reduction
65318	32954 ChEBI	sodium acetate	+	assimilation
65318	28017 ChEBI	starch	-	hydrolysis
65318	9300 ChEBI	suberic acid	+	assimilation
65318	27897 ChEBI	tryptophan	+	energy source
65318	53423 ChEBI	tween 40	-	hydrolysis
65318	53425 ChEBI	tween 60	-	hydrolysis
65318	53426 ChEBI	tween 80	-	hydrolysis
65318	18186 ChEBI	tyrosine	-	hydrolysis
65318	31011 ChEBI	valerate	+	assimilation

Metabolite production

@ref	Chebi-ID	Metabolite	Production
65318	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
65318	35581 ChEBI	indole	+

Enzymes

@ref	Value	Activity	Ec
65318	acid phosphatase	-	3.1.3.2
65318	alkaline phosphatase	+	3.1.3.1
65318	alpha-chymotrypsin	+	3.4.21.1
65318	alpha-fucosidase	-	3.2.1.51
65318	alpha-galactosidase	-	3.2.1.22
65318	alpha-glucosidase	-	3.2.1.20
65318	alpha-mannosidase	-	3.2.1.24
65318	beta-galactosidase	-	3.2.1.23
65318	beta-glucosidase	-	3.2.1.21
65318	beta-glucuronidase	-	3.2.1.31
65318	catalase	+	1.11.1.6
65318	cystine arylamidase	+	3.4.11.3
65318	cytochrome oxidase	+	1.9.3.1
65318	esterase (C 4)	+
65318	esterase Lipase (C 8)	+
65318	leucine arylamidase	+	3.4.11.1
65318	lipase (C 14)	-
65318	N-acetyl-beta-glucosaminidase	-	3.2.1.52
65318	naphthol-AS-BI-phosphohydrolase	+
65318	trypsin	-	3.4.21.4
65318	tryptophan deaminase	+	4.1.99.1
65318	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

@ref

65318

Fatty acid	Percentage	ECL
C19:0 cyclo ω8c	33.6
C16:0	16.2
C18:1ω7c and/or C18:1ω6c	11.1
C18:0 cyclo	8.1
C12:0	5.5
C13:1 at 12–13	4.9
C16:1ω7c and/or C16:1ω6c	4.2
C16:0 3OH	3.3
C18:0	2.4
C18:1 2OH	2.2
C18:1ω7c 11-methyl	2
unknown 10.928 and/or C12:0 aldehyde	1.9	11
C14:0	1.5
C20:2ω6,9c	1.5
C17:1 anteiso ω9c	0.5
C19:0 iso	0.4
C10:0	0.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#River (Creek)
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
65318	stream bank soil	near Kyonggi University, Suwon, Gyeonggi-Do	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence KY117476 (>99% sequence identity) for Ferrovibrio from Microbeatlas

Aquatic Samples	670
Soil Samples	1228
Animal Samples	130
Plant Samples	1784
Total Samples	3812

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Database
65318	Ferrovibrio soli strain A15 16S ribosomal RNA gene, partial sequence	KY117476

GC content

@ref	GC-content (mol%)	Method
65318	63.4	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Ferrovibrio soli sp. nov., a novel cellulolytic bacterium isolated from stream bank soil.	Dahal RH, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.002527	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65318	Ram Hari Dahal, Jaisoo Kim: Ferrovibrio soli sp. nov., a novel cellulolytic bacterium isolated from stream bank soil. IJSEM 68: 427 - 431 2018 ( DOI 10.1099/ijsem.0.002527 , PubMed 29219808 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Ferrovibrio soli (KEMB 9005-522, KACC 19102, NBRC 112682)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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