Qipengyuania algicida (KEMB 9005-328, JCM 31499, Yeonmyeong 2-22)

Name: Qipengyuania algicida (KEMB 9005-328, JCM 31499, Yeonmyeong 2-22)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158576

Type strain

Culture col. no. KEMB 9005-328 JCM 31499 Yeonmyeong 2-22

NCBI tax ID(s) 1836209

Special Collections JCM Literature strains

History J. Kim; Kyonggi Univ., South Korea; Yeonmyeong 2-22.

Links

Qipengyuania algicida KEMB 9005-328 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from surface water sample.

Gram-negative motile rod-shaped colony-forming aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 28294

JCM 31499

@ref 20215

Last LPSN update 2026-02-09 11:38:22

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Erythrobacteraceae

Genus Qipengyuania

Species Qipengyuania algicida

Full scientific name Qipengyuania algicida (Kristyanto et al. 2017) Xu et al. 2020

Synonyms (1)

Porphyrobacter algicida

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Flagellum arrangement	Confidence
65282	negative	rod-shaped	peritrichous
65282		coccus-shaped
65282		ovoid-shaped
125438	negative			97.924

Colony morphology

@ref	Colony color	Colony shape	Medium used
65282	yellow	circular	marine agar 2216

Culture and growth conditions

Culture medium

@ref	Name	Growth
65282	Marine agar (MA)
65282	Reasoner's 2A agar (R2A)
65282	Nutrient agar (NA)
65282	tryptic soy agar
65282	LB (Luria-Bertani) MEDIUM
65282	brain heart infusion agar
65282	MacConkey agar

Culture temp

@ref	Growth	Type	Temperature (°C)
65282	positive	growth	10-40
65282	positive	optimum	30
67770	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
65282	positive	optimum	9
65282	positive	growth	4-9	alkaliphile

Physiology and metabolism

Oxygen tolerance

65282

Oxygen toleranceaerobe

Spore formation

65282

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
65282	NaCl	positive	growth	0-9 %(w/v)
65282	NaCl	positive	optimum	0 %(w/v)

Observation

67770

Observationquinones: Q-10

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
65282	17128 ChEBI	adipate	+	assimilation
65282	27613 ChEBI	amygdalin	-	fermentation
65282	22599 ChEBI	arabinose	-	fermentation
65282		casein	-	hydrolysis
65282	16947 ChEBI	citrate	-	assimilation
65282	17634 ChEBI	D-glucose	+	assimilation
65282	16899 ChEBI	D-mannitol	-	assimilation
65282	16024 ChEBI	D-mannose	+	assimilation
65282	27689 ChEBI	decanoate	-	assimilation
65282	16991 ChEBI	dna	-	hydrolysis
65282	4853 ChEBI	esculin	+	hydrolysis
65282	5291 ChEBI	gelatin	-	hydrolysis
65282	17234 ChEBI	glucose	-	fermentation
65282	30849 ChEBI	L-arabinose	-	assimilation
65282	25115 ChEBI	malate	+	assimilation
65282	17306 ChEBI	maltose	+	assimilation
65282	29864 ChEBI	mannitol	-	fermentation
65282	28053 ChEBI	melibiose	-	fermentation
65282	17268 ChEBI	myo-inositol	-	fermentation
65282	506227 ChEBI	N-acetylglucosamine	-	assimilation
65282	17632 ChEBI	nitrate	-	reduction
65282	18401 ChEBI	phenylacetate	-	assimilation
65282	32032 ChEBI	potassium gluconate	-	assimilation
65282	26546 ChEBI	rhamnose	-	fermentation
65282	53258 ChEBI	sodium citrate	-	assimilation
65282	30911 ChEBI	sorbitol	-	fermentation
65282	28017 ChEBI	starch	+	hydrolysis
65282	17992 ChEBI	sucrose	-	fermentation
65282	53426 ChEBI	tween 80	+	hydrolysis
65282	16199 ChEBI	urea	-	hydrolysis

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.	Resistance conc.
65282	28971	ampicillin	30 µg (disc)
65282	17698	chloramphenicol	100 µg (disc)
65282	27641	cycloheximide		30 µg (disc)
65282	17833	gentamicin	10 µg (disc)
65282	6104	kanamycin	30 µg (disc)
65282	100147	nalidixic acid		30 µg (disc)
65282	7507	neomycin	30 µg (disc)
65282	28368	novobiocin		30 µg (disc)
65282	17334	penicillin		10 µg (disc)
65282	28077	rifampicin	10 µg (disc)
65282	17076	streptomycin		10 µg (disc)
65282	9332	sulfamethoxazole		30 µg (disc)
65282	27902	tetracycline		30 µg (disc)
65282	45924	trimethoprim		30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite
65282	15688 ChEBI	acetoin
65282	16136 ChEBI	hydrogen sulfide
65282	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
65282	15688 ChEBI	acetoin	+
65282	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
65282	acid phosphatase	+	3.1.3.2
65282	alkaline phosphatase	+	3.1.3.1
65282	alpha-chymotrypsin	+	3.4.21.1
65282	alpha-fucosidase	-	3.2.1.51
65282	alpha-galactosidase	-	3.2.1.22
65282	alpha-glucosidase	+	3.2.1.20
65282	alpha-mannosidase	-	3.2.1.24
65282	arginine dihydrolase	-	3.5.3.6
65282	beta-galactosidase	-	3.2.1.23
65282	beta-glucosidase	+	3.2.1.21
65282	beta-glucuronidase	-	3.2.1.31
65282	cystine arylamidase	+	3.4.11.3
65282	esterase (C 4)	+
65282	esterase Lipase (C 8)	+
65282	leucine arylamidase	+	3.4.11.1
65282	lipase (C 14)	-
65282	lysine decarboxylase	-	4.1.1.18
65282	N-acetyl-beta-glucosaminidase	-	3.2.1.52
65282	naphthol-AS-BI-phosphohydrolase	+
65282	trypsin	+	3.4.21.4
65282	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

@ref

65282

Fatty acid	Percentage
C18:1ω7c	49.7
C16:0	12
C18:1ω7c 11-methyl	11.5
C14:0 2OH	7.9
C16:1ω7c and/or C16:1ω6c	5.1
C18:1ω5c	4.1
C17:1ω6c	4
C15:0 2OH	1.2
C18:0	0.9
C19:0 cyclo ω8c	0.7
C17:0	0.6
C16:1ω5c	0.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Surface water

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture duration	Enrichment culture temperature	Isolation procedure
65282	surface water sample	Geoje Island in the South Sea	Republic of Korea	KOR	Asia	35.3072	128.651 35.3072/128.651	marine agar 2216	1 days	25	The sample was filtered through a 0.22 µm pore-size membrane filter (GF/F; Merck Milipore) and spread-plated on marine agar 2216. Incubation for 14 days at 25°C.
67770	Surface seawater of Geoje Island		Republic of Korea	KOR	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM982802v1 assembly for Qipengyuania algicida KEMB 9005-328	contig	GCA_009828025	1836209.3	2915044429	1836209	70.95

16S sequences

@ref	Description	Accession	Database
65282	Qipengyuania algicida strain Yeonmyeong 2-22 16S ribosomal RNA gene, partial sequence	KU981071

GC content

@ref	GC-content (mol%)	Method
65282	63	genome sequence analysis
67770	60.7	genome sequence analysis
67770	63	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Qipengyuania algicida KEMB 9005-328
NCBI: GCA_009828025.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.92	no
125438	anaerobic	anaerobicⓘ	no	94.42	yes
125438	aerobic	aerobicⓘ	yes	88.92	no
125438	spore-forming	spore-formingⓘ	no	89.35	yes
125438	thermophilic	thermophileⓘ	no	97.32	yes
125438	flagellated	motile2+ⓘ	yes	63.79	yes

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65282	Sylvia Kristyanto, Sang Don Lee, Jaisoo Kim: Porphyrobacter algicida sp. nov., an algalytic bacterium isolated from seawater. IJSEM 67: 4526 - 4533 2017 ( DOI 10.1099/ijsem.0.002324 , PubMed 28984558 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Qipengyuania algicida (KEMB 9005-328, JCM 31499, Yeonmyeong 2-22)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_009828025

16S sequences

GC content

Genome-based predictions

Predictions

Literature

References

BacDive

Help

Social Media