Name: Anoxynatronum buryatiense Su22
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158563

Type strain:

Species: Anoxynatronum buryatiense

Strain Designation: Su22

Culture col. no.: VKM B-2510, CECT 8731, DSM 21847

NCBI tax ID(s): 489973 (species)

Section

Anoxynatronum buryatiense Su22 is an anaerobe, halotolerant, Gram-positive bacterium that was isolated from bottom sediment sample.

Gram-positive
rod-shaped
anaerobe
halotolerant
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Anoxynatronum*
	Species	**Anoxynatronum buryatiense**
	Full Scientific Name (LPSN)	Anoxynatronum buryatiense Ryzhmanova et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #65262]	Gram stain	positive

[Ref.: #65262]	Cell length	2-6.5 µm

[Ref.: #65262]	Cell width	0.4-0.7 µm

[Ref.: #65262]	Cell shape	rod-shaped

[Ref.: #65262]	Motility	no

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #65262]			growth	20-40 °C
[Ref.: #65262]			optimum	30 °C

[Ref.: #65262]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #65262]			optimum	9.6
[Ref.: #65262]			growth	7.4-11

Information on physiology and metabolism Physiology and metabolism

[Ref.: #65262]	Oxygen tolerance	anaerobe
[Ref.: #65262]	Oxygen tolerance	aerotolerant

[Ref.: #65262]

Halophily / tolerance level

halotolerant

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #65262]		NaCl		growth	0-2.4	M
[Ref.: #65262]		NaCl		optimum	0.76-1.09	M

[Ref.: #65262]

Observation

Does not carry out the Stickland reaction.

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65262]	amino acid ChEBI	-	assimilation
[Ref.: #65262]	butanol ChEBI	-	assimilation
[Ref.: #65262]	casamino acids	+	assimilation
[Ref.: #65262]	casein	+	assimilation
[Ref.: #65262]	chitin ChEBI	-	assimilation
[Ref.: #65262]	choline ChEBI	-	assimilation
[Ref.: #65262]	citrate ChEBI	-	assimilation
[Ref.: #65262]	fumarate ChEBI	-	assimilation
[Ref.: #65262]	glutathione ChEBI	-	assimilation
[Ref.: #65262]	lactate ChEBI	-	assimilation
[Ref.: #65262]	methanol ChEBI	-	assimilation
[Ref.: #65262]	peptone	-	assimilation
[Ref.: #65262]	propionate ChEBI	-	assimilation
[Ref.: #65262]	pyruvate ChEBI	-	assimilation
[Ref.: #65262]	tryptone	+	assimilation
[Ref.: #65262]	uracil ChEBI	-	assimilation
[Ref.: #65262]	yeast extract	+	assimilation
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #65262]		catalase	-	1.11.1.6
[Ref.: #65262]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65262]	Sample type/isolated from	bottom sediment sample
[Ref.: #65262]	Geographic location (country and/or sea, region)	alkaline low mineralization lake Sulphatnoe (Selenginsky district, Buryatia)
[Ref.: #65262]	Country	Russia
[Ref.: #65262]	Country ISO 3 Code	RUS
[Ref.: #65262]	Continent	Asia
[Ref.: #65262]	Enrichment culture	AM1
[Ref.: #65262]	Enrichment culture composition	(g l-1): Na2CO3, 1.6; NaHCO3, 0.6; KCl, 0.2; MgCl2 x 6H2O, 0.1; NH4Cl, 0.5; K2HPO4 , 0.2; yeast extract, 2.0; Na2S x 9H2O, 0.25; trace element solution SL-10 (320 medium, DSMZ), 1.0 ml; vitamin solution (141 medium, DSMZ), 10.0 ml
[Ref.: #65262]	Enrichment culture duration	2 weeks
[Ref.: #65262]	Enrichment culture temperature	28-30 ̊C
[Ref.: #65262]	Isolation/enrichment procedure	The material for the examination were single colonies developed on the AM1 medium supplemented with Difco agar (15 g l-1) under 100 % nitrogen atmosphere at 28-30°C. Colonies appearing 2 weeks after plating.
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU315116 (>99% sequence identity) for Anoxynatronum buryatiense from Microbeatlas

Aquatic Samples	57
Soil Samples	1
Animal Samples	9
Plant Samples
Total Samples	67

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65262]	16S rRNA gene sequence	EU315116		GenBank

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Anoxynatronum buryatiense Su22	2706794923	draft	JGI IMG/M	489973 tax ID	*

[Ref.: #65262]

GC-content

46.1 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #65262]

Culture collection no.

VKM B-2510, CECT 8731, DSM 21847

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Anoxynatronum buryatiense sp. nov., an anaerobic alkaliphilic bacterium from a low mineralization soda lake in Buryatia, Russia.	Ryzhmanova Y, Oshurkova V, Troshina O, Abashina T, Ariskina E, Avtukh A, Shcherbakova V	Int J Syst Evol Microbiol	10.1099/ijsem.0.002365	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65262

Yana Ryzhmanova, Victoria Oshurkova, Olga Troshina, Tatyana Abashina, Elena Ariskina, Alexander Avtukh, Viktoria Shcherbakova: Anoxynatronum buryatiense sp. nov., an anaerobic alkaliphilic bacterium from a low mineralization soda lake in Buryatia, Russia. IJSEM 67: 4704 - 4709 2017 ( DOI 10.1099/ijsem.0.002365 , PubMed 28984544 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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