Aeribacillus composti (KCTC 33824, JCM 31580, N.8)

Name: Aeribacillus composti (KCTC 33824, JCM 31580, N.8)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158560

Type strain

Strain Designation N.8

Culture col. no. KCTC 33824 JCM 31580 N.8

NCBI tax ID(s) 1868734

Special Collections JCM KCTC Literature strains

History A. Poli; Natl. Res. Counc. (C.N.R.), Inst. of Biomol. Chem. (I.C.B.), Italy; N.8. <- Annarita Poli, Consiglio Nazionale delle Ricerche(CNR)

Links

Aeribacillus composti N.8 is an obligate aerobe, haloalkaliphilic, spore-forming bacterium that forms circular colonies and was isolated from compost sample.

spore-forming Gram-positive rod-shaped colony-forming obligate aerobe haloalkaliphilic genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 25289

KCTC 33824,JCM 31580

@ref 20215

Last LPSN update 2026-02-09 11:38:21

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Aeribacillus

Species Aeribacillus composti

Full scientific name Aeribacillus composti Finore et al. 2017

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
65257	positive	1.5-5 µm	0.5-0.6 µm	rod-shaped

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
65257	1 mm	cream	circular	1 day	solid medium

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition
65257	solid medium		growth medium A containing (l-1): peptone, 8 g; yeast extract 4 g and NaCl 2 g.

Culture temp

@ref	Growth	Type	Temperature (°C)
65257	positive	growth	50-65
65257	positive	optimum	60
67770	positive	growth	55
67771	positive	growth	60

Culture pH

@ref	Ability	Type	PH	PH range
65257	positive	optimum	9
65257	positive	growth	5.5-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
65257	obligate aerobe
67771	aerobe

Spore formation

@ref	Type of spore	Spore formation	Confidence
65257	endospore
125438			92.58

Halophily

@ref	Halophily level	Salt	Growth	Tested relation	Concentration
65257	haloalkaliphilic	NaCl	positive	growth	2-9 %(w/v)
65257	haloalkaliphilic	NaCl	positive	optimum	6 %(w/v)

Observation

@ref	Observation
65257	Positive for aminopeptidase test.
67770	quinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
65257	16651 ChEBI	(S)-lactate	+	carbon source
65257	28816 ChEBI	2-deoxy-d-ribose	+	carbon source
65257	18240 ChEBI	4-hydroxy-L-proline	+	nitrogen source
65257	85146 ChEBI	carboxymethylcellulose	-	hydrolysis
65257		casein	-	hydrolysis
65257	17108 ChEBI	D-arabinose	+	assimilation
65257	17634 ChEBI	D-glucose	-	builds gas from
65257	17634 ChEBI	D-glucose	+	builds acid from
65257	17634 ChEBI	D-glucose	+	carbon source
65257	16899 ChEBI	D-mannitol	+	carbon source
65257	16024 ChEBI	D-mannose	+	carbon source
65257	16988 ChEBI	D-ribose	+	carbon source
65257	17924 ChEBI	D-sorbitol	+	carbon source
65257	65327 ChEBI	D-xylose	+	carbon source
65257	29806 ChEBI	fumarate	+	carbon source
65257	5291 ChEBI	gelatin	-	hydrolysis
65257	17754 ChEBI	glycerol	+	carbon source
65257	15428 ChEBI	glycine	+	nitrogen source
65257	606565 ChEBI	hippurate	+	hydrolysis
65257	16977 ChEBI	L-alanine	+	nitrogen source
65257	30849 ChEBI	L-arabinose	+	assimilation
65257	16467 ChEBI	L-arginine	+	nitrogen source
65257	17196 ChEBI	L-asparagine	+	nitrogen source
65257	29991 ChEBI	L-aspartate	+	nitrogen source
65257	18287 ChEBI	L-fucose	+	carbon source
65257	29985 ChEBI	L-glutamate	+	nitrogen source
65257	18050 ChEBI	L-glutamine	+	nitrogen source
65257	15971 ChEBI	L-histidine	+	nitrogen source
65257	17191 ChEBI	L-isoleucine	+	nitrogen source
65257	15603 ChEBI	L-leucine	+	nitrogen source
65257	18019 ChEBI	L-lysine	+	nitrogen source
65257	16643 ChEBI	L-methionine	+	nitrogen source
65257	15729 ChEBI	L-ornithine	+	nitrogen source
65257	17295 ChEBI	L-phenylalanine	+	nitrogen source
65257	62345 ChEBI	L-rhamnose	+	carbon source
65257	17115 ChEBI	L-serine	+	nitrogen source
65257	16857 ChEBI	L-threonine	+	nitrogen source
65257	16828 ChEBI	L-tryptophan	+	nitrogen source
65257	17895 ChEBI	L-tyrosine	+	hydrolysis
65257	17895 ChEBI	L-tyrosine	+	nitrogen source
65257	16414 ChEBI	L-valine	+	nitrogen source
65257	17306 ChEBI	maltose	+	carbon source
65257	61993 ChEBI	maltotriose	+	carbon source
65257	28044 ChEBI	phenylalanine	-	hydrolysis
65257	15361 ChEBI	pyruvate	+	carbon source
65257	28017 ChEBI	starch	-	hydrolysis
65257	30031 ChEBI	succinate	+	carbon source
65257	17992 ChEBI	sucrose	+	carbon source
65257	27082 ChEBI	trehalose	+	carbon source
65257	16199 ChEBI	urea	-	hydrolysis
65257	37166 ChEBI	xylan	-	hydrolysis
65257	17151 ChEBI	xylitol	+	carbon source

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.	Resistance conc.
65257	28971	ampicillin	25 µg (disc)
65257	28669	bacitracin	10 Unit
65257	17698	chloramphenicol	10 µg (disc)
65257	48923	erythromycin	30 µg (disc)
65257	71321	fusidate	10 µg (disc)
65257	17833	gentamicin	30 µg (disc)
65257	6104	kanamycin	30 µg (disc)
65257	6472	lincomycin	15 µg (disc)
65257	7507	neomycin	30 µg (disc)
65257	28368	novobiocin	30 µg (disc)
65257	7660	nystatin		100 µg (disc)
65257	17334	penicillin	10 Unit
65257	17076	streptomycin	25 µg (disc)
65257	27902	tetracycline	30 µg (disc)
65257	28001	vancomycin	30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
65257	15688 ChEBI	acetoin

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
65257	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
65257	catalase	+	1.11.1.6
65257	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Biodegradation	#Composting

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture composition	Enrichment culture temperature	Isolation procedure
65257	compost sample	Composting Experimental Centre (CESCO) in Cilento National Park, Salerno	Italy	ITA	Europe	40.2885	15.3608 40.2885/15.3608	growth medium A	(l-1): peptone, 8 g; yeast extract 4 g and NaCl, 2 g	60	The compost sample (1 g) was dissolved in 200 ml sterilised 50 mM phosphate buffer (pH 7.0) with agitation (120 r.p.m.) for 24 h at 60°C. The suspension obtained was used to inoculate 10 ml growth medium A. After 48 h at 60°C, the growth that had occurred was used as an inoculum for the same solid medium obtained by adding agar [1.8 % (w/v)]. After 48 h incubation at 60°C growth had occurred and colonies were purified by using the serial dilution-plating method at 60°C followed by restreaking on
67770	Curing step of an olive mill pomace compost sample collected at the Composting Experimental Centre	Salerno	Italy	ITA	Europe
67771	From compost	Laurino, Salerno-Experimental Composting Center	Italy	ITA	Europe

Taxonmaps

69479

Global distribution of 16S sequence LT594972 (>99% sequence identity) for Aeribacillus from Microbeatlas

Aquatic Samples	1682
Soil Samples	1959
Animal Samples	5491
Plant Samples	654
Total Samples	9786

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM782755v1 assembly for Aeribacillus composti KCTC 33824	scaffold	GCA_007827555	1868734.3	2802428823	1868734	62.52

16S sequences

@ref	Description	Accession	Database
65257	Aeribacillus sp. n.8 partial 16S rRNA gene, isolate n.8	LT594972

GC content

@ref	GC-content (mol%)	Method
65257	40.5	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Aeribacillus composti KCTC 33824
NCBI: GCA_007827555

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	78.40	no
125439	motility	BacteriaNetⓘ	yes	73.60	no
125439	gram_stain	BacteriaNetⓘ	variable	79.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	85.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Aeribacillus composti KCTC 33824
NCBI: GCA_007827555.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	78.10	yes
125438	anaerobic	anaerobicⓘ	no	89.74	yes
125438	aerobic	aerobicⓘ	yes	80.40	yes
125438	spore-forming	spore-formingⓘ	yes	92.58	yes
125438	thermophilic	thermophileⓘ	yes	52.18	yes
125438	flagellated	motile2+ⓘ	yes	81.41	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aeribacillus composti sp. nov., a thermophilic bacillus isolated from olive mill pomace compost.	Finore I, Gioiello A, Leone L, Orlando P, Romano I, Nicolaus B, Poli A	Int J Syst Evol Microbiol	10.1099/ijsem.0.002391	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65257	Ilaria Finore, Alessia Gioiello, Luigi Leone, Pierangelo Orlando, Ida Romano, Barbara Nicolaus, Annarita Poli: Aeribacillus composti sp. nov., a thermophilic bacillus isolated from olive mill pomace compost. IJSEM 67: 4830 - 4835 2017 ( DOI 10.1099/ijsem.0.002391 , PubMed 28984237 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Aeribacillus composti (KCTC 33824, JCM 31580, N.8)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_007827555

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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