Name: Soonwooa purpurea I54
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158543

Type strain:

Species: Soonwooa purpurea

Strain Designation: I54

Culture col. no.: KCTC 52722, JCM 31880

Strain history: J.-C. Chae; Chonbuk Natl. Univ., South Korea; I54.

NCBI tax ID(s): 1938559 (species)

Special Collections

Section

When using BacDive for research please cite our paper

Soonwooa purpurea I54 is an aerobe, Gram-negative bacterium that forms circular colonies and was isolated from water sample.

colony-forming
Gram-negative
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	Soonwooa
	Species	Soonwooa purpurea
	Full Scientific Name (LPSN)	Soonwooa purpurea Sirra et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #65233]	Gram stain	negative

[Ref.: #65233]	Cell length	1-2 µm

[Ref.: #65233]	Cell width	0.3-0.4 µm

[Ref.: #65233]	Motility	no

[Ref.: #65233]	Colony color	pale brown
[Ref.: #65233]	Colony shape	circular
[Ref.: #65233]	Cultivation medium used	tryptone soy agar

Information on culture and growth conditions Culture and growth conditions

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Culture medium

tryptone soy agar

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Culture medium growth

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Culture medium

Nutrient agar (NA)

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Culture medium growth

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Culture medium

LB (Luria-Bertani) MEDIUM

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Culture medium growth

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Culture medium

Reasoner's 2A agar

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Culture medium growth

		Temperature
[Ref.: #65233]	growth	20-37 °C
[Ref.: #65233]	optimum	30 °C
[Ref.: #67770]	growth	30 °C

	pH	Kind of pH		pH
[Ref.: #65233]			optimum	7
[Ref.: #65233]			growth	7-8

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #65233]		NaCl		growth	0-2	%(w/v)

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Observation

quinones: MK-6

[Ref.: #65233]	Name of tolerated compound	carbon dioxide
[Ref.: #65233]	Tolerance percentage	5

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65233]	2,3-butanediol ChEBI	+	respiration
[Ref.: #65233]	2-hydroxybutyrate ChEBI	+	respiration
[Ref.: #65233]	2-oxobutanoate ChEBI	+	respiration
[Ref.: #65233]	2-oxoglutarate ChEBI	+	respiration
[Ref.: #65233]	2-oxopentanoate ChEBI	-	respiration
[Ref.: #65233]	3-hydroxybutyrate ChEBI	+	respiration
[Ref.: #65233]	4-hydroxy-L-proline ChEBI	+	respiration
[Ref.: #65233]	4-hydroxybutyrate ChEBI	+	respiration
[Ref.: #65233]	4-hydroxyphenylacetic acid ChEBI	+	respiration
[Ref.: #65233]	acetate ChEBI	+	respiration
[Ref.: #65233]	alpha-cyclodextrin ChEBI	+	respiration
[Ref.: #65233]	alpha-D-glucose ChEBI	+	respiration
[Ref.: #65233]	alpha-lactose ChEBI	+	respiration
[Ref.: #65233]	bromosuccinate ChEBI	+	respiration
[Ref.: #65233]	cellobiose ChEBI	+	respiration
[Ref.: #65233]	cis-aconitate ChEBI	+	respiration
[Ref.: #65233]	citrate ChEBI	-	assimilation
[Ref.: #65233]	citrate ChEBI	-	respiration
[Ref.: #65233]	D-alanine ChEBI	-	respiration
[Ref.: #65233]	D-arabitol ChEBI	+	respiration
[Ref.: #65233]	D-fructose ChEBI	+	respiration
[Ref.: #65233]	D-galactonic acid lactone ChEBI	+	respiration
[Ref.: #65233]	D-galactose ChEBI	+	respiration
[Ref.: #65233]	D-galacturonic acid ChEBI	+	respiration
[Ref.: #65233]	D-glucarate ChEBI	-	respiration
[Ref.: #65233]	D-gluconate ChEBI	+	respiration
[Ref.: #65233]	D-glucosaminic acid ChEBI	+	respiration
[Ref.: #65233]	D-glucose 6-phosphate ChEBI	+	respiration
[Ref.: #65233]	D-glucuronate ChEBI	+	respiration
[Ref.: #65233]	D-mannitol ChEBI	+	respiration
[Ref.: #65233]	D-mannose ChEBI	-	respiration
[Ref.: #65233]	D-psicose ChEBI	+	respiration
[Ref.: #65233]	D-serine ChEBI	-	respiration
[Ref.: #65233]	D-sorbitol ChEBI	+	respiration
[Ref.: #65233]	dextrin ChEBI	-	respiration
[Ref.: #65233]	DL-carnitine ChEBI	-	respiration
[Ref.: #65233]	erythritol ChEBI	+	respiration
[Ref.: #65233]	esculin ChEBI	+	hydrolysis
[Ref.: #65233]	ethanolamine ChEBI	+	respiration
[Ref.: #65233]	formate ChEBI	+	respiration
[Ref.: #65233]	gamma-aminobutyric acid ChEBI	+	respiration
[Ref.: #65233]	gentiobiose ChEBI	+	respiration
[Ref.: #65233]	glucose ChEBI	-	fermentation
[Ref.: #65233]	glucose 1-phosphate ChEBI	+	respiration
[Ref.: #65233]	glucuronamide ChEBI	+	respiration
[Ref.: #65233]	glycerol ChEBI	+	respiration
[Ref.: #65233]	glycerol 1-phosphate ChEBI	+	respiration
[Ref.: #65233]	glycogen ChEBI	+	respiration
[Ref.: #65233]	glycyl L-aspartic acid ChEBI	+	respiration
[Ref.: #65233]	glycyl-l-glutamate ChEBI	+	respiration
[Ref.: #65233]	inosine ChEBI	+	respiration
[Ref.: #65233]	itaconate ChEBI	+	respiration
[Ref.: #65233]	L-alaninamide ChEBI	+	respiration
[Ref.: #65233]	L-alanine ChEBI	+	respiration
[Ref.: #65233]	L-alanylglycine ChEBI	+	respiration
[Ref.: #65233]	L-arabinose ChEBI	+	respiration
[Ref.: #65233]	L-asparagine ChEBI	+	respiration
[Ref.: #65233]	L-aspartate ChEBI	+	respiration
[Ref.: #65233]	L-fucose ChEBI	+	respiration
[Ref.: #65233]	L-glutamate ChEBI	+	respiration
[Ref.: #65233]	L-histidine ChEBI	-	respiration
[Ref.: #65233]	L-leucine ChEBI	+	respiration
[Ref.: #65233]	L-ornithine ChEBI	+	respiration
[Ref.: #65233]	L-phenylalanine ChEBI	+	respiration
[Ref.: #65233]	L-proline ChEBI	+	respiration
[Ref.: #65233]	L-pyroglutamic acid ChEBI	-	respiration
[Ref.: #65233]	L-rhamnose ChEBI	+	respiration
[Ref.: #65233]	L-serine ChEBI	+	respiration
[Ref.: #65233]	L-threonine ChEBI	+	respiration
[Ref.: #65233]	lactate ChEBI	+	respiration
[Ref.: #65233]	lactulose ChEBI	+	respiration
[Ref.: #65233]	malonate ChEBI	+	respiration
[Ref.: #65233]	maltose ChEBI	+	respiration
[Ref.: #65233]	melibiose ChEBI	+	respiration
[Ref.: #65233]	methyl beta-D-glucopyranoside ChEBI	+	respiration
[Ref.: #65233]	methyl pyruvate ChEBI	+	respiration
[Ref.: #65233]	monomethyl succinate ChEBI	+	respiration
[Ref.: #65233]	myo-inositol ChEBI	+	respiration
[Ref.: #65233]	N-acetylgalactosamine ChEBI	+	respiration
[Ref.: #65233]	N-acetylglucosamine ChEBI	+	respiration
[Ref.: #65233]	nitrate ChEBI	-	reduction
[Ref.: #65233]	phenylethylamine ChEBI	-	respiration
[Ref.: #65233]	propionate ChEBI	+	respiration
[Ref.: #65233]	putrescine ChEBI	-	respiration
[Ref.: #65233]	quinate ChEBI	+	respiration
[Ref.: #65233]	raffinose ChEBI	+	respiration
[Ref.: #65233]	ribitol ChEBI	+	respiration
[Ref.: #65233]	sebacic acid ChEBI	+	respiration
[Ref.: #65233]	succinamate ChEBI	+	respiration
[Ref.: #65233]	succinate ChEBI	+	respiration
[Ref.: #65233]	sucrose ChEBI	+	respiration
[Ref.: #65233]	thymidine ChEBI	+	respiration
[Ref.: #65233]	trehalose ChEBI	+	respiration
[Ref.: #65233]	turanose ChEBI	+	respiration
[Ref.: #65233]	tween 40 ChEBI	+	respiration
[Ref.: #65233]	tween 80 ChEBI	-	respiration
[Ref.: #65233]	urea ChEBI	-	hydrolysis
[Ref.: #65233]	uridine ChEBI	-	respiration
[Ref.: #65233]	urocanic acid ChEBI	+	respiration
[Ref.: #65233]	xylitol ChEBI	+	respiration
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #65233]	acetoin ChEBI	no
[Ref.: #65233]	hydrogen sulfide ChEBI	no
[Ref.: #65233]	indole ChEBI	yes

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #65233]		acetoin ChEBI	-
[Ref.: #65233]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #65233]	acid phosphatase	+	3.1.3.2
[Ref.: #65233]	alkaline phosphatase	+	3.1.3.1
[Ref.: #65233]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #65233]	alpha-fucosidase	-	3.2.1.51
[Ref.: #65233]	alpha-galactosidase	-	3.2.1.22
[Ref.: #65233]	alpha-glucosidase	-	3.2.1.20
[Ref.: #65233]	alpha-mannosidase	-	3.2.1.24
[Ref.: #65233]	arginine dihydrolase	-	3.5.3.6
[Ref.: #65233]	beta-galactosidase	-	3.2.1.23
[Ref.: #65233]	beta-glucosidase	+	3.2.1.21
[Ref.: #65233]	beta-glucuronidase	-	3.2.1.31
[Ref.: #65233]	catalase	+	1.11.1.6
[Ref.: #65233]	cystine arylamidase	+	3.4.11.3
[Ref.: #65233]	cytochrome oxidase	+	1.9.3.1
[Ref.: #65233]	esterase (C 4)	+
[Ref.: #65233]	esterase Lipase (C 8)	+
[Ref.: #65233]	gelatinase	+
[Ref.: #65233]	leucine arylamidase	+	3.4.11.1
[Ref.: #65233]	lipase (C 14)	+
[Ref.: #65233]	lysine decarboxylase	-	4.1.1.18
[Ref.: #65233]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #65233]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #65233]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #65233]	trypsin	+	3.4.21.4
[Ref.: #65233]	tryptophan deaminase	+	4.1.99.1
[Ref.: #65233]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65233]	Sample type/isolated from	water sample
[Ref.: #65233]	Geographic location (country and/or sea, region)	freshwater river in Iksan
[Ref.: #65233]	Country	Republic of Korea
[Ref.: #65233]	Country ISO 3 Code	KOR
[Ref.: #65233]	Continent	Asia
[Ref.: #65233]	Enrichment culture	Mueller-Hinton agar plates
[Ref.: #65233]	Isolation/enrichment procedure	Pure culture of the strain was obtained by repeated streaking on Mueller-Hinton agar plates containing chloramphenicol (16 µg ml^-1) and was preserved as stocks in each of glycerol (20 %), sucrose (10 %) and skim milk (10 %) at -80°C.

[Ref.: #67770]	Sample type/isolated from	Water sample of a freshwater river in Iksan
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65233]	Soonwooa sp. I54 partial 16S rRNA gene, strain I54	LT717348		GenBank ENA

[Ref.: #65233]	GC-content	33.9-33.5 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	34.2 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #65233]

Culture collection no.

KCTC 52722, JCM 31880

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Soonwooa purpurea sp. nov., isolated from a fresh water river.	Sirra MRS, Padakandla SR, Chae JC	Int J Syst Evol Microbiol	10.1099/ijsem.0.002441	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65233

Mercy Rose Stella Sirra, Shalem Raj Padakandla, Jong-Chan Chae: Soonwooa purpurea sp. nov., isolated from a fresh water river. IJSEM 67: 5193 - 5197 2017 ( DOI 10.1099/ijsem.0.002441 , PubMed 29058660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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