Name: Desulfohalovibrio reitneri L21-Syr-AB
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158486

Type strain:

Species: Desulfohalovibrio reitneri

Strain Designation: L21-Syr-AB

Culture col. no.: DSM 26903, JCM 18662

Strain history: S. Spring; DSMZ, Germany; L21-Syr-AB.

NCBI tax ID(s): 1307759 (species)

SI-ID 397183

DSM 26903

Special Collections

DSMZ
JCM

Section

Desulfohalovibrio reitneri L21-Syr-AB is a mesophilic bacterium that was isolated from suboxic zone of a cyanobacterial mat at the littoral zone of a hypersaline lake.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfovibrionales*
	Family	*Desulfovibrionaceae*
	Genus	*Desulfohalovibrio*
	Species	**Desulfohalovibrio reitneri**
	Full Scientific Name (LPSN)	Desulfohalovibrio reitneri Spring et al. 2019

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65162]

Culture medium

DESULFOHALOVIBRIO (L21 LS) MEDIUM (DSMZ Medium 1526c)

[Ref.: #65162]

Culture medium growth

[Ref.: #65162]

Culture medium link

Medium recipe at MediaDive

[Ref.: #65162]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #65162]			growth	35 °C
[Ref.: #67770]			growth	35 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7, MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65162]	Sample type/isolated from	suboxic zone of a cyanobacterial mat at the littoral zone of a hypersaline lake
[Ref.: #65162]	Geographic location (country and/or sea, region)	Kiritimati, Lake 21
[Ref.: #65162]	Country	Kiribati
[Ref.: #65162]	Country ISO 3 Code	KIR
[Ref.: #65162]	Continent	Australia and Oceania

[Ref.: #67770]	Sample type/isolated from	Suboxic zone of a lithifying cyanobacterial mat in the hypersaline Lake 21 at the Kiritimai Atoll
[Ref.: #67770]	Country	Kiribati
[Ref.: #67770]	Country ISO 3 Code	KIR
[Ref.: #67770]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Microbial community	#Microbial mat
#Condition	#Saline	-
#Host	#Microbial	#Bacteria

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC665952 (>99% sequence identity) for Desulfohalovibrio reitneri subclade from Microbeatlas

Aquatic Samples	289
Soil Samples	27
Animal Samples	108
Plant Samples	8
Total Samples	432

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Desulfohalovibrio reitneri strain L21-Syr-AB N911DRAFT_scf7180000000014_quiver.3_C, whole genome shotgun sequence	JOMJ01000003	2531670	GenBank ENA	1307759 tax ID
[Ref.: #65162]	Desulfovibrio sp. L21-Syr-AB 16S ribosomal RNA gene, partial sequence	KC665952	1534	GenBank ENA	1307759 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Desulfohalovibrio reitneri L21-Syr-AB	GCA_000711295	contig	GenBank ENA	1307759 tax ID
[Ref.: #66792]	Desulfohalovibrio reitneri L21-Syr-AB	2571042914	draft	JGI IMG/M	1307759 tax ID	*

[Ref.: #67770]	GC-content	65.47 mol%	genome sequence analysis
[Ref.: #65162]	GC-content	65.5 mol%	sequence analysis

Availability in culture collections External links

[Ref.: #65162]

Culture collection no.

DSM 26903, JCM 18662

[Ref.: #111281]

SI-ID 397183

Literature:

	Title	Authors	Journal	DOI	Year
	Sulfate-Reducing Bacteria That Produce Exopolymers Thrive in the Calcifying Zone of a Hypersaline Cyanobacterial Mat.	Spring S, Sorokin DY, Verbarg S, Rohde M, Woyke T, Kyrpides NC	Front Microbiol	10.3389/fmicb.2019.00862	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65162

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26903

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#111281

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397183.1 )

* These data were automatically processed and therefore are not curated

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