Actinoalloteichus fjordicus (DSM 46856, CECT 9355, GBA 129-24)

Name: Actinoalloteichus fjordicus (DSM 46856, CECT 9355, GBA 129-24)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 158482

Type strain

Strain Designation GBA 129-24, MP129-24

Culture col. no. DSM 46856 CECT 9355 GBA 129-24 MP129-24

NCBI tax ID(s) 1612552

Special Collections DSMZ

Links

Actinoalloteichus fjordicus GBA 129-24 is a mesophilic prokaryote that was isolated from marine sponge Geodia barretti.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398740

CECT 9355,DSM 46855

@ref 20215

Last LPSN update 2025-12-16 10:08:02

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Actinoalloteichus

Species Actinoalloteichus fjordicus

Full scientific name Actinoalloteichus fjordicus Nouioui et al. 2025

BacDive ID	Other strains from **Actinoalloteichus fjordicus** (1)	Type strain
158481	A. fjordicus ADI 127-17, MP127-17, DSM 46855, CECT 9355 (type strain)

Morphology

Cell morphology

@ref	Motility	Confidence
125438		90
125438		91.835
125439		99.8

Multimedia

@ref:	65158
multimedia content:	DSM_46856.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_46856.jpg
caption:	Medium 987+Seawater 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
65158	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
65158	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	#Porifera (Sponges)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
65158	marine sponge Geodia barretti	Trondheim fjord, Tautra ridge (63° 36' N and 10° 31' E, 60 m below sea level)	Norway	NOR	Europe	63.6	10.5167 63.6/10.5167

Taxonmaps

69479

Global distribution of 16S sequence MF440324 (>99% sequence identity) for Actinoalloteichus from Microbeatlas

Aquatic Samples	370
Soil Samples	2648
Animal Samples	458
Plant Samples	335
Total Samples	3811

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM194164v1 assembly for Actinoalloteichus sp. GBA129-24	complete	GCA_001941645	1612551.4	2615840680	1612551	98.45

Genome browser: GCA_001941645

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
65158	Actinoalloteichus sp. strain DSM 46856 16S ribosomal RNA gene, partial sequence	MF440324	1399		1872128

GC content

@ref	GC-content (mol%)	Method
65158	70.10	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Actinoalloteichus sp. GBA129-24
PATRIC: 1612551.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	82.30	no
125439	motility	BacteriaNetⓘ	no	89.10	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Actinoalloteichus sp. GBA129-24
PATRIC: 1612551.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	91.84	no
125438	anaerobic	anaerobicⓘ	no	96.67	no
125438	spore-forming	spore-formingⓘ	yes	82.86	no
125438	aerobic	aerobicⓘ	yes	87.76	no
125438	thermophilic	thermophileⓘ	no	95.00	no
125438	flagellated	motile2+ⓘ	no	90.00	no

Literature

Title	Authors	Journal	DOI	Year
Validation List no. 223. Valid publication of new names and new combinations effectively published outside the IJSEM.	Oren A, Goker M.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006699	2025
Actinoalloteichus fjordicus sp. nov. isolated from marine sponges: phenotypic, chemotaxonomic and genomic characterisation.	Nouioui I, Ruckert C, Willemse J, van Wezel GP, Klenk HP, Busche T, Kalinowski J, Bredholt H, Zotchev SB.	Antonie Van Leeuwenhoek	10.1007/s10482-017-0920-9	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65158	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46856
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Actinoalloteichus fjordicus (DSM 46856, CECT 9355, GBA 129-24)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_001941645

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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