Name: Roseomonas globiformis 0113-15
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158324

Type strain:

Species: Roseomonas globiformis

Strain Designation: 0113-15

Culture col. no.: DSM 102171, CPCC 100847, KCTC 52094, CPCC 100847T

Strain history: <- Yu-Qin Zhang, Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences & Peking Union Medical College

NCBI tax ID(s): 2307229 (species)

SI-ID 400732

DSM 102171

Section

Roseomonas globiformis 0113-15 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from From air.

coccus-shaped
colony-forming
Gram-negative
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Roseomonas*
	Species	**Roseomonas globiformis**
	Full Scientific Name (LPSN)	Roseomonas globiformis Fang et al. 2018

Synonym

Pseudoroseomonas globiformis

Information on morphological and physiological properties Morphology

[Ref.: #66704]	Gram stain	negative

[Ref.: #66704]	Cell length	1.3-1.9 µm

[Ref.: #66704]	Cell shape	coccus-shaped
[Ref.: #66704]	Cell shape	ovoid-shaped

[Ref.: #66704]	Colony color	dark pink
[Ref.: #66704]	Colony shape	circular
[Ref.: #66704]	Cultivation medium used	Trypticase Soy Agar (TSA)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65000]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #65000]

Culture medium growth

[Ref.: #65000]

Culture medium link

Medium recipe at MediaDive

[Ref.: #65000]

Culture medium composition

expand / minimize

[Ref.: #66704]

Culture medium

Nutrient agar (NA)

[Ref.: #66704]

Culture medium growth

[Ref.: #66704]

Culture medium

Reasoner's 2A agar (R2A)

[Ref.: #66704]

Culture medium growth

[Ref.: #66704]

Culture medium

tryptic soy agar (TSA)

[Ref.: #66704]

Culture medium growth

		Temperature
[Ref.: #65000]	growth	30 °C
[Ref.: #66704]	growth	10-37 °C
[Ref.: #66704]	optimum	28-30 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #65000]	Temperature range	mesophilic
[Ref.: #66704]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #66704]			optimum	7
[Ref.: #66704]			growth	6.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #66704]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #66704]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #66704]		NaCl		growth	0.5-1.0	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #66704]	(S)-lactate ChEBI	+	carbon source
[Ref.: #66704]	1 % sodium lactate	-	carbon source
[Ref.: #66704]	2-oxobutanoate ChEBI	-	carbon source
[Ref.: #66704]	2-oxoglutarate ChEBI	+	carbon source
[Ref.: #66704]	3-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #66704]	3-O-methyl-D-glucose ChEBI	-	carbon source
[Ref.: #66704]	4-hydroxyphenylacetic acid ChEBI	-	carbon source
[Ref.: #66704]	acetic acid ChEBI	+	carbon source
[Ref.: #66704]	acetoacetate ChEBI	+	carbon source
[Ref.: #66704]	alpha-D-glucose ChEBI	-	carbon source
[Ref.: #66704]	alpha-hydroxybutyrate	-	carbon source
[Ref.: #66704]	aztreonam ChEBI	-	carbon source
[Ref.: #66704]	bromosuccinate ChEBI	+	carbon source
[Ref.: #66704]	casein	-	hydrolysis
[Ref.: #66704]	cellobiose ChEBI	-	carbon source
[Ref.: #66704]	citric acid ChEBI	-	carbon source
[Ref.: #66704]	D-arabitol ChEBI	-	carbon source
[Ref.: #66704]	D-aspartate ChEBI	-	carbon source
[Ref.: #66704]	D-fructose ChEBI	-	carbon source
[Ref.: #66704]	D-fructose 6-phosphate ChEBI	+	carbon source
[Ref.: #66704]	D-fucose ChEBI	-	carbon source
[Ref.: #66704]	D-galactose ChEBI	-	carbon source
[Ref.: #66704]	D-galacturonic acid ChEBI	+	carbon source
[Ref.: #66704]	D-glucarate ChEBI	+	carbon source
[Ref.: #66704]	D-glucose 6-phosphate ChEBI	+	carbon source
[Ref.: #66704]	D-glucuronate ChEBI	-	carbon source
[Ref.: #66704]	D-glucuronate ChEBI	+	carbon source
[Ref.: #66704]	D-malate ChEBI	+	carbon source
[Ref.: #66704]	D-mannitol ChEBI	-	carbon source
[Ref.: #66704]	D-mannose ChEBI	+	carbon source
[Ref.: #66704]	D-serine ChEBI	+	carbon source
[Ref.: #66704]	D-sorbitol ChEBI	-	carbon source
[Ref.: #66704]	D-trehalose ChEBI	-	carbon source
[Ref.: #66704]	dextrin ChEBI	+	carbon source
[Ref.: #66704]	dna ChEBI	-	hydrolysis
[Ref.: #66704]	esculin ChEBI	-	hydrolysis
[Ref.: #66704]	formate ChEBI	-	carbon source
[Ref.: #66704]	fusidate ChEBI	-	carbon source
[Ref.: #66704]	galactarate ChEBI	-	carbon source
[Ref.: #66704]	gamma-aminobutyric acid ChEBI	-	carbon source
[Ref.: #66704]	gelatin ChEBI	-	carbon source
[Ref.: #66704]	gelatin ChEBI	-	hydrolysis
[Ref.: #66704]	gentiobiose ChEBI	-	carbon source
[Ref.: #66704]	gluconate ChEBI	+	carbon source
[Ref.: #66704]	glucuronamide ChEBI	+	carbon source
[Ref.: #66704]	glycerol ChEBI	+	carbon source
[Ref.: #66704]	glycine-proline ChEBI	-	carbon source
[Ref.: #66704]	inosine ChEBI	-	carbon source
[Ref.: #66704]	L-alanine ChEBI	-	carbon source
[Ref.: #66704]	L-arginine ChEBI	-	carbon source
[Ref.: #66704]	L-aspartate ChEBI	+	carbon source
[Ref.: #66704]	L-fucose ChEBI	-	carbon source
[Ref.: #66704]	L-galactonic acid gamma-lactone ChEBI	+	carbon source
[Ref.: #66704]	L-glutamate ChEBI	+	carbon source
[Ref.: #66704]	L-histidine ChEBI	-	carbon source
[Ref.: #66704]	L-malate ChEBI	+	carbon source
[Ref.: #66704]	L-pyroglutamic acid ChEBI	-	carbon source
[Ref.: #66704]	L-rhamnose ChEBI	+	carbon source
[Ref.: #66704]	L-serine ChEBI	+	carbon source
[Ref.: #66704]	L-tyrosine ChEBI	-	hydrolysis
[Ref.: #66704]	lactose ChEBI	-	carbon source
[Ref.: #66704]	lithium chloride ChEBI	-	carbon source
[Ref.: #66704]	maltose ChEBI	-	carbon source
[Ref.: #66704]	melibiose ChEBI	-	carbon source
[Ref.: #66704]	methyl (R)-lactate ChEBI	-	carbon source
[Ref.: #66704]	methyl beta-D-glucopyranoside ChEBI	-	carbon source
[Ref.: #66704]	methyl pyruvate ChEBI	-	carbon source
[Ref.: #66704]	milk	+	degradation
[Ref.: #66704]	myo-inositol ChEBI	-	carbon source
[Ref.: #66704]	N-acetyl-D-mannosamine ChEBI	-	carbon source
[Ref.: #66704]	N-acetylgalactosamine ChEBI	-	carbon source
[Ref.: #66704]	N-acetylglucosamine ChEBI	-	carbon source
[Ref.: #66704]	n-acetylneuraminate ChEBI	-	carbon source
[Ref.: #66704]	nalidixic acid ChEBI	-	carbon source
[Ref.: #66704]	nitrate ChEBI	-	reduction
[Ref.: #66704]	pectin ChEBI	-	carbon source
[Ref.: #66704]	potassium tellurite ChEBI	-	carbon source
[Ref.: #66704]	propionate ChEBI	+	carbon source
[Ref.: #66704]	quinate ChEBI	+	carbon source
[Ref.: #66704]	raffinose ChEBI	-	carbon source
[Ref.: #66704]	salicin ChEBI	-	carbon source
[Ref.: #66704]	sodium bromate ChEBI	-	carbon source
[Ref.: #66704]	sodium butyrate ChEBI	-	carbon source
[Ref.: #66704]	stachyose ChEBI	-	carbon source
[Ref.: #66704]	starch ChEBI	-	hydrolysis
[Ref.: #66704]	sucrose ChEBI	-	carbon source
[Ref.: #66704]	turanose ChEBI	-	carbon source
[Ref.: #66704]	tween 20 ChEBI	+	hydrolysis
[Ref.: #66704]	tween 40 ChEBI	-	carbon source
[Ref.: #66704]	tween 40 ChEBI	-	hydrolysis
[Ref.: #66704]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #66704]		hydrogen sulfide ChEBI	no
[Ref.: #66704]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #66704]	alkaline phosphatase	+	3.1.3.1
[Ref.: #66704]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #66704]	catalase	+	1.11.1.6
[Ref.: #66704]	esterase	+
[Ref.: #66704]	esterase Lipase (C 8)	+
[Ref.: #66704]	leucine arylamidase	+	3.4.11.1
[Ref.: #66704]	lipase	+
[Ref.: #66704]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #66704]	trypsin	+	3.4.21.4
[Ref.: #66704]	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #66704]

Fatty acid	Percentage
C18:1 w7c	22.9
C15:0 anteiso	17.3
C16:0	13.4
C15:0 iso	10
C16:1 w7c / C16:1 w6c	6.1
C19:0 cyclo w8c	4.6
C17:0 anteiso	4.2
C17:0 iso	4.2
C16:0 3OH	2.1
C18:0	2
C14:0	1.9
C16:1 w5c	1.7
C16:0 iso	1.4
C16:1 w11c	1.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67771]	Sample type/isolated from	From air
[Ref.: #67771]	Geographic location (country and/or sea, region)	Beijing
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia

[Ref.: #65000]	Sample type/isolated from	Air
[Ref.: #65000]	Geographic location (country and/or sea, region)	Beijing (39° 52' 42'' N, 116° 23' 24'' E)
[Ref.: #65000]	Country	China
[Ref.: #65000]	Country ISO 3 Code	CHN
[Ref.: #65000]	Continent	Asia
[Ref.: #65000]	Geographic location	39.8783°/116.3900°

[Ref.: #66704]	Sample type/isolated from	air during a hazy day
[Ref.: #66704]	Geographic location (country and/or sea, region)	Beijing
[Ref.: #66704]	Country	China
[Ref.: #66704]	Country ISO 3 Code	CHN
[Ref.: #66704]	Continent	Asia
[Ref.: #66704]	Geographic location	39.8783°/116.3900°
[Ref.: #66704]	Enrichment culture	nutrient agar
[Ref.: #66704]	Enrichment culture duration	3 days
[Ref.: #66704]	Enrichment culture temperature	28 ̊C
[Ref.: #66704]	Isolation/enrichment procedure	Airborne microbes were collected by placing nutrient agar and tryptone soy agar dishes outdoors during a hazy day in Beijing, China without covering lids for 15 min. Strain CPCC 100847 was isolated from the NA plate after culturing at 28°C for 3 days.
* marker position based on {}

Isolation sources categories

#Environmental

#Air

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65000]	Roseomonas sp. strain CPCC100847 16S ribosomal RNA gene, partial sequence	MG589944	1479	ENA	2307229 tax ID

[Ref.: #65000]	GC-content	65.2 mol%
[Ref.: #66704]	GC-content	65.2 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #65000]

Culture collection no.

DSM 102171, CPCC 100847, KCTC 52094, CPCC 100847T

[Ref.: #111134]

SI-ID 400732

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas globiformis sp. nov., an airborne bacteria isolated from an urban area of Beijing.	Fang XM, Bai JL, Zhang DW, Su J, Zhao LL, Liu HY, Zhang YQ, Yu LY	Int J Syst Evol Microbiol	10.1099/ijsem.0.002985	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65000

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102171

#66704

Xiao-Mei Fang, Jing-Lin Bai, De-Wu Zhang, Jing Su, Li-Li Zhao, Hong-Yu Liu, Yu-Qin Zhang, Li-Yan Yu: Roseomonas globiformis sp. nov., an airborne bacteria isolated from an urban area of Beijing. IJSEM 68: 3301 - 3306 2018 ( DOI 10.1099/ijsem.0.002985 , PubMed 30152751 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#111134

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400732.1 )

* These data were automatically processed and therefore are not curated

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